LOCUS BC001380 2301 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens succinate dehydrogenase complex, subunit A,
flavoprotein (Fp), mRNA (cDNA clone MGC:1484 IMAGE:3051442),
complete cds.
ACCESSION BC001380
VERSION BC001380.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2301)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2301)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001380.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759079.
FEATURES Location/Qualifiers
source 1..2301
/db_xref="H-InvDB:HIT000030364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1484 IMAGE:3051442"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2301
/gene="SDHA"
/gene_synonym="FP"
/gene_synonym="SDHF"
/db_xref="GeneID:6389"
/db_xref="HGNC:HGNC:10680"
/db_xref="MIM:600857"
CDS 30..2024
/gene="SDHA"
/gene_synonym="FP"
/gene_synonym="SDHF"
/codon_start=1
/product="succinate dehydrogenase complex, subunit A,
flavoprotein (Fp)"
/protein_id="AAH01380.1"
/db_xref="GeneID:6389"
/db_xref="HGNC:HGNC:10680"
/db_xref="MIM:600857"
/translation="MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRAS
AKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVA
AQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPF
SRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE
YFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDG
TAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVA
KDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAG
VDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGAN
RLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRT
SELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETL
ELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQKKPFEEHWRK
HTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPAIRSY"
BASE COUNT 556 a 560 c 689 g 496 t
ORIGIN
1 ggcgggactg cgcggcggca acagcagaca tgtcgggggt ccggggcctg tcgcggctgc
61 tgagcgctcg gcgcctggcg ctggccaagg cgtggccaac agtgttgcaa acaggaaccc
121 gaggttttca cttcactgtt gatgggaaca agagggcatc tgctaaagtt tcagattcca
181 tttctgctca gtatccagta gtggatcatg aatttgatgc agtggtggta ggcgctggag
241 gggcaggctt gcgagctgca tttggccttt ctgaggcagg gtttaataca gcatgtgtta
301 ccaagctgtt tcctaccagg tcacacactg ttgcagcaca gggaggaatc aatgctgctc
361 tggggaacat ggaggaggac aactggaggt ggcatttcta cgacaccgtg aagggctccg
421 actggctggg ggaccaggat gccatccact acatgacgga gcaggccccc gccgccgtgg
481 tcgagctaga aaattatggc atgccgttta gcagaactga agatgggaag atttatcagc
541 gtgcatttgg tggacagagc ctcaagtttg gaaagggcgg gcaggcccat cggtgctgct
601 gtgtggctga tcggactggc cactcgctat tgcacacctt atatggaagg tctctgcgat
661 atgataccag ctattttgtg gagtattttg ccttggatct cctgatggag aatggggagt
721 gccgtggtgt catcgcactg tgcatagagg acgggtccat ccatcgcata agagcaaaga
781 acactgttgt tgccacagga ggctacgggc gcacctactt cagctgcacg tctgcccaca
841 ccagcactgg cgacggcacg gccatgatca ccagggcagg ccttccttgc caggacctag
901 agtttgttca gttccacccc acaggcatat atggtgctgg ttgtctcatt acggaaggat
961 gtcgtggaga gggaggcatt ctcattaaca gtcaaggcga aaggtttatg gagcgatacg
1021 cccctgtcgc gaaggacctg gcgtctagag atgtggtgtc tcggtccatg actctggaga
1081 tccgagaagg aagaggctgt ggccctgaga aagatcacgt ctacctgcag ctgcaccacc
1141 tacctccaga gcagctggcc acgcgcctgc ctggcatttc agagacagcc atgatcttcg
1201 ctggcgtgga cgtcacgaag gagccgatcc ctgtcctccc caccgtgcat tataacatgg
1261 gcggcattcc caccaactac aaggggcagg tcctgaggca cgtgaatggc caggatcaga
1321 ttgtgcccgg cctgtacgcc tgtggggagg ccgcctgtgc ctcggtacat ggtgccaacc
1381 gcctcggggc aaactcgctc ttggacctgg ttgtctttgg tcgggcatgt gccctgagca
1441 tcgaagagtc atgcaggcct ggagataaag tccctccaat taaaccaaac gctggggaag
1501 aatctgtcat gaatcttgac aaattgagat ttgctgatgg aagcataaga acatcggaac
1561 tgcgactcag catgcagaag tcaatgcaaa atcatgctgc cgtgttccgt gtgggaagcg
1621 tgttgcaaga aggttgtggg aaaatcagca agctctatgg agacctaaag cacctgaaga
1681 cgttcgaccg gggaatggtc tggaacacgg acctggtgga gaccctggag ctgcagaacc
1741 tgatgctgtg tgcgctgcag accatctacg gagcagaggc acggaaggag tcacggggcg
1801 cgcatgccag ggaagactac aaggtgcgga ttgatgagta cgattactcc aagcccatcc
1861 aggggcaaca gaagaagccc tttgaggagc actggaggaa gcacaccctg tcctatgtgg
1921 acgttggcac tgggaaggtc actctggaat atagacccgt gatcgacaaa actttgaacg
1981 aggctgactg tgccaccgtc ccgccagcca ttcgctccta ctgatgagac aagatgtggt
2041 gatgacagaa tcagcttttg taattatgta taatagctca tgcatgtgtc catgtcataa
2101 ctgtcttcat acgcttctgc actctgggga agaaggagta cattgaaggg agattggcac
2161 ctagtggctg ggagcttgcc aggaacccag tggccaggga gcgtggcact tacctttgtc
2221 ccttgcttca ttcttgtgag atgataaaac tgggcacagc tcttaaataa aatataaatg
2281 aacaaaaaaa aaaaaaaaaa a
//