LOCUS BC001372 1307 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens UBX domain protein 1, mRNA (cDNA clone MGC:2274
IMAGE:3051213), complete cds.
ACCESSION BC001372
VERSION BC001372.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001372.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147677.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000030356"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2274 IMAGE:3051213"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1307
/gene="UBXN1"
/gene_synonym="2B28"
/gene_synonym="UBXD10"
/db_xref="GeneID:51035"
/db_xref="HGNC:HGNC:18402"
CDS 133..1071
/gene="UBXN1"
/gene_synonym="2B28"
/gene_synonym="UBXD10"
/codon_start=1
/product="UBX domain protein 1"
/protein_id="AAH01372.1"
/db_xref="GeneID:51035"
/db_xref="HGNC:HGNC:18402"
/translation="MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHED
DPDVDEPLETPLGHILGREPTSSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELV
AQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKAEELAA
RQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQV
RLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADMER
PLQELGMAARLETRTRNWGSREACLGKGGMQREGAL"
BASE COUNT 323 a 329 c 428 g 227 t
ORIGIN
1 ggctgctata gagccgggtg agagagcgag cgcccgtcgg cgggtgtcga gggcgggttg
61 cctcgcgctg acccttcccg ccctccttct cgtcacacac caggtccccg cggaagccgc
121 ggtgtcggcg ccatggcgga gctgacggct cttgagagtc tcatcgagat gggcttcccc
181 aggggacgcg cggagaaggc tctggccctc acagggaacc agggcatcga ggctgcgatg
241 gactggctga tggagcacga agacgacccc gatgtggacg agcctttaga gactcccctt
301 ggacatatcc tgggacggga gcccacttcc tcagagcaag gcggccttga aggatctggt
361 tctgctgccg gagaaggcaa acccgctttg agtgaagagg aaagacagga acaaactaag
421 aggatgttgg agctggtggc ccagaagcag cgggagcgtg aagaaagaga ggaacgggag
481 gcattggaac gggaacggca gcgcaggaga caagggcaag agttgtcagc agcacgacag
541 cggctacagg aagatgagat gcgccgggct gctgaggaga ggcggaggga aaaggccgag
601 gagttagcag ccagacaaag agttagagaa aagatcgaga gggacaaagc agagagagcc
661 aagaagtatg gtggcagtgt gggctctcag ccacccccag tggcaccaga gccaggtcct
721 gttccctctt ctcccagcca ggagcctccc accaagcggg agtatgacca gtgtcgcata
781 caggtcaggc tgccagatgg gacctcactg acccagacgt tccgggcccg ggaacagctg
841 gcagctgtga ggctctatgt ggagctccac cgtggggagg aactaggtgg gggccaggac
901 cctgtgcaat tgctcagtgg cttccccaga cgggccttct cagaagctga catggagcgg
961 cctctgcagg agctgggtat ggctgcaaga ctagaaacca ggactagaaa ctgggggagt
1021 agggaggcat gcctaggaaa aggagggatg caaagagaag gggctttgtg aacatggtgc
1081 aaggccagga attttgggag caaaaaccaa gtatccttgt ggttcaagcc tgttttcttc
1141 catcttcagg actcgtgcct tctgctgttc tcattgtggc caagaaatgt cccagctgag
1201 ggcctttgtc ccattgtccc tctgtgaccc cttcatcttt gataaagcac tgacatctcc
1261 ttcctaataa atagaccctg agttctgtaa aaaaaaaaaa aaaaaaa
//