LOCUS BC001363 1050 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens jumping translocation breakpoint, mRNA (cDNA clone
MGC:650 IMAGE:3050800), complete cds.
ACCESSION BC001363
VERSION BC001363.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1050)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1050)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455406.
FEATURES Location/Qualifiers
source 1..1050
/db_xref="H-InvDB:HIT000030349"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:650 IMAGE:3050800"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1050
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="HSPC222"
/gene_synonym="PAR"
/db_xref="GeneID:10899"
/db_xref="HGNC:HGNC:6201"
/db_xref="MIM:604671"
CDS 411..851
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="HSPC222"
/gene_synonym="PAR"
/codon_start=1
/product="jumping translocation breakpoint"
/protein_id="AAH01363.1"
/db_xref="GeneID:10899"
/db_xref="HGNC:HGNC:6201"
/db_xref="MIM:604671"
/translation="MLAGAGRPGLPQGRHLCWLLCAFTLKLCQAEAPVQEEKLSASTS
NLPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALME
QRLFWKFEGAVVCVALIFACLVIIRQRQLDRKALEKVRKQIESI"
BASE COUNT 244 a 293 c 291 g 222 t
ORIGIN
1 ggcacgaggc cccagcgggc gacgaccgaa cgcccccggg aacaccgggc cccgagctcg
61 gtcccgcgcc cgaggatcct ccacggggct agatggctgc gtcgggggcg ggagcggagg
121 tgagcgggcg ctagggccgc gagcccccgc cggcctttcc tccagcgccc tgcggacccc
181 gcagaaggcg ctcgcctccc tagcccgcaa aaacatatcg atttttctcg ctgtggcaac
241 ggggacgtcc tgatagatcc tctgctccaa taggcaactc cggccttccc tgccctgacc
301 tggaacctct gggagggctg cagagtaagt gccgcctctg cgctccgacg gaggcacgag
361 gcctgtggag taggtccctc tgttccgaca ggtgcgacac ttggcgctcc atgcttgcgg
421 gtgccgggag gcctggcctc ccccagggcc gccacctctg ctggttgctc tgtgctttca
481 ccttaaagct ctgccaagca gaggctcccg tgcaggaaga gaagctgtca gcaagcacct
541 caaatttgcc atgctggctg gtggaagagt ttgtggtagc agaagagtgc tctccatgct
601 ctaatttccg ggctaaaact acccctgagt gtggtcccac aggatatgta gagaaaatca
661 catgcagctc atctaagaga aatgagttca aaagctgccg ctcagctttg atggaacaac
721 gcttattttg gaagttcgaa ggggctgtcg tgtgtgtggc cctgatcttc gcttgtcttg
781 tcatcattcg tcagcgacaa ttggacagaa aggctctgga aaaggtccgg aagcaaatcg
841 agtccatata gctacattcc acccttgtat cctgggtctt agagacccta tctcagacag
901 tgaaagtgaa atggactgat ttgcactctt ggttctttgg agccttgtgg tggaatcccc
961 ttttccccat cttcttcttt cagatcatta atgagcagaa taaaaagagt aaaatggaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//