LOCUS BC001351 1681 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens four and a half LIM domains 3, mRNA (cDNA clone
MGC:8696 IMAGE:2964682), complete cds.
ACCESSION BC001351
VERSION BC001351.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1681)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001351.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54112384.
FEATURES Location/Qualifiers
source 1..1681
/db_xref="H-InvDB:HIT000030337"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8696 IMAGE:2964682"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1681
/gene="FHL3"
/gene_synonym="SLIM2"
/db_xref="GeneID:2275"
/db_xref="HGNC:HGNC:3704"
/db_xref="MIM:602790"
CDS 170..1012
/gene="FHL3"
/gene_synonym="SLIM2"
/codon_start=1
/product="four and a half LIM domains 3"
/protein_id="AAH01351.1"
/db_xref="GeneID:2275"
/db_xref="HGNC:HGNC:3704"
/db_xref="MIM:602790"
/translation="MSESFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQ
QLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCS
ACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAP
RCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFA
PKCSSCKRPIVGLGGGKYVSFEDRHWHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCS
QAGP"
BASE COUNT 334 a 548 c 447 g 352 t
ORIGIN
1 cacggtccgt ctgcagtcgg cagcctcgcc ggcagctcgc tcggcccccg cttggcccgg
61 cccgcaggta ggagccgccg agggacgcgg cgcccggttc ccggccccgc ctgcgccgcg
121 cgctccccgc tcccgccgcc cgcttcgagg gttctctccc cttgccacca tgagcgagtc
181 atttgactgt gcaaaatgca acgagtccct gtatggacgc aagtacatcc agacagacag
241 cggcccctac tgtgtgccct gctatgacaa tacctttgcc aacacctgtg ctgagtgcca
301 gcagcttatc gggcatgact cgagggagct gttctatgaa gaccgccatt tccacgaggg
361 ctgcttccgc tgctgccgct gccagcgctc actagccgat gaacccttca cctgccagga
421 cagtgagctg ctctgcaatg actgctactg cagtgcgttt tcctcgcagt gctccgcttg
481 tggggagact gtcatgcctg ggtcccggaa gctggaatat ggaggccaga catggcatga
541 gcactgcttc ctgtgcagtg gctgtgaaca gccactgggc tcccgttctt ttgtgcccga
601 caagggtgct cactactgcg tgccctgcta tgagaacaag tttgctcctc gctgcgcccg
661 ctgcagcaag acgctgacac agggtggagt gacataccgt gatcagccgt ggcatcgaga
721 atgtctggtc tgtaccggat gccagacgcc cctggcaggg cagcagttca cctcccggga
781 tgaagatccc tactgtgtgg cctgttttgg agaactcttt gcacctaagt gcagcagctg
841 caagcgcccc atcgtaggac tcggtggagg caagtatgtg tcctttgaag accgacactg
901 gcaccacaac tgcttctcct gcgcccgctg ctctacctcc ctggtgggcc agggcttcgt
961 accggatgga gaccaagtgc tctgccaggg ctgtagccag gcagggccct aagccagggc
1021 tcctggaccc aggctttccc ataccacggg cccaggactg tggctccttt tctaaaccac
1081 ctctgggact cagctccccc cgccaaaaaa aatgggtctc cttctgggct ccaggattgt
1141 ctccccactc cagcatcccc aaactggtac tccctgaccc aggcccccaa tcctgggctc
1201 ttacagagcc tccatgagtc aagccccctc cccacacctg gactccagaa ttcaccctct
1261 cccctgcagt ctgggttccc agactgagtc ctctccccaa atcagggctc tagacccgag
1321 ccctccaaac ctggactctg ggacttaggc ccccttaaat ctagacttct ctttataggt
1381 ttcaggtctc ctatgggtgc ctgggaagtc cttgaaagtg gactgttctc aggcttgacc
1441 tgccccaccc catccccgcg gttgaggctg tgggggcagc agatcaggag cccactgata
1501 aggggcccta gggtacaggg tgctgcccag caggtcgcca ccgagtgtct tctcatttta
1561 tttcagctcc attttgccca tagatgggca gaggggtgag attggctcat cccccttcca
1621 gattctgcaa taaagcggtg tgaggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 a
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