LOCUS BC001339 1757 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens shugoshin-like 1 (S. pombe), mRNA (cDNA clone
IMAGE:3461987), partial cds.
ACCESSION BC001339
VERSION BC001339.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1757)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1757)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001339.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1757
/db_xref="H-InvDB:HIT000085996"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3461987"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1757
/gene="SGOL1"
/db_xref="GeneID:151648"
CDS <1..1525
/gene="SGOL1"
/codon_start=2
/product="SGOL1 protein"
/protein_id="AAH01339.2"
/db_xref="GeneID:151648"
/translation="RPRVRRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKML
VLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGM
DPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIP
ENVQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKR
KANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSN
DSNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYT
DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPA
VALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ"
BASE COUNT 658 a 339 c 315 g 445 t
ORIGIN
1 tcgcccacgc gtccgaagga ataaaaactt ggcagagatt ggcaaacgca ggtcttttat
61 agctgcacca tgccaaataa tcaccaacac ttctacactg ctgaaaaatt accaagacaa
121 caacaaaatg ttagttttag ctttggaaaa tgaaaaatcc aaagtgaaag aagcccaaga
181 tatcatccta cagctgagaa aagaatgtta ctatctcaca tgtcagctat atgcattgaa
241 aggaaaactt acatcacaac aaacagtaga acctgctcag aaccaggaaa tatgttcctc
301 tggaatggac cccaatagtg atgacagctc cagaaattta tttgtgaagg atttaccgca
361 aattcctctt gaagaaactg aacttccagg acaaggagaa tcatttcaaa tagaagatca
421 gatacctact attcctcaag acacactggg agttgatttt gattcaggtg aagctaagtc
481 tactgataat gtcttaccta gaactgtatc tgttcgtagc agtttaaaga aacattgtaa
541 cagtatatgt cagtttgata gcttggatga ttttgaaacc agtcatttgg cagggaagtc
601 ttttgaattc gaaagagttg gatttttaga cccactagta aacatgcaca tacctgaaaa
661 tgtacaacac aatgcttgtc aatggagcaa ggaccaagtt aacttatcac caaagctgat
721 tcagccagga acgtttacta aaacaaaaga agacatttta gaatctaaat ctgaacaaac
781 taaaagtaag caaagagata cacaagaaag aaaaagagaa gagaaaagaa aagctaacag
841 gagaaaatca aaacgtatgt caaaatataa agagaataaa agcgaaaata aaaaaactgt
901 tccccaaaaa aaaatgcaca aatctgtcag ttccaatgat gcttacaatt ttaatttgga
961 agagggtgtt catcttactc ctttccgaca aaaagtgagc aatgactcta atagagaaga
1021 aaacaacgag tctgaagtga gcctctgtga atcaagtggt tcaggagatg attccgatga
1081 cctctatttg cccacttgca agtacattca gaatcccacg agcaattcag atagaccagt
1141 caccaggcct ctagctaaaa gagcactgaa atacacagat gaaaaagaga cggagggttc
1201 taagccaaca aaaactccta ccactacacc acctgaaact cagcagtcac ctcatcttag
1261 cctgaaggat atcaccaatg tctccttgta tcctgttgtg aaaatcagaa gactttctct
1321 ttctccaaaa aagaataaag caagcccagc agtggctctg cctaaacgta ggtgcacagc
1381 cagcgtgaac tataaggagc ccaccctcgc ttcgaaactg agaagagggg acccttttac
1441 agatttgtgt tttttgaatt ctcctatttt caagcagaaa aaggatttga gacgttctaa
1501 aaaaagtatg aaacaaatac aatgaaggtt tcgttggata ttgtttaaat tcaatctaca
1561 cctctttctg ttgcttcagg agaggatctg taagagtaca caaacagagt gagccattgc
1621 catagaatat tctcttgaca ggaccctagc tcataaacat ttcttcagaa ctatacttca
1681 aatgggatgc tttgtattaa aactttaata aatttaattt attttttctt ttgaatataa
1741 ataaaaaaaa aaaaaaa
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