LOCUS BC001332 1727 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA
clone IMAGE:3459631), partial cds.
ACCESSION BC001332
VERSION BC001332.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1727)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1727)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: m Column: 16.
FEATURES Location/Qualifiers
source 1..1727
/db_xref="H-InvDB:HIT000085992"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3459631"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1727
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
CDS <1..1148
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/codon_start=3
/product="SNAP47 protein"
/protein_id="AAH01332.1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
/translation="TRPGEILVSFPLSSIVEIKKEASHFIFSSITILEKGHAKHWFSS
LRPSRNVVFSIIEHFWRELLLSQPGAMADASVPRTRGEELTGLMAGSQKRLEDTARVL
HHQGQQLDSVMRGLDKMESDLEVADRLLTELESPAWWPFSSKLWKTPPETKPREDVSM
TSCEPFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHDSSSLLMHRFEREDVD
DIKVHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSKKMELLEDALVLRSA
RTSSPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPALSEADTQELTQI
LRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT"
BASE COUNT 425 a 462 c 482 g 358 t
ORIGIN
1 ccacgcgtcc gggagagatt ctggtcagct tccccctctc cagcatagtt gagatcaaga
61 aggaggcttc acattttatc ttcagctcca tcaccatcct ggagaagggc catgccaagc
121 actggttcag ctccctgcgg ccaagtcgaa atgtggtctt cagcatcatc gagcatttct
181 ggagggagct gctgctgtct cagcctggag ccatggcaga cgcatctgtc ccaaggaccc
241 ggggcgagga gctgacggga ctcatggctg gatcccagaa acgcctggag gacacggcga
301 gggtcctgca ccaccagggc cagcagctgg acagcgtcat gagaggcctg gacaagatgg
361 agtcagacct ggaggtggcg gacagattgc tgacagaact ggaatctcct gcttggtggc
421 cctttagctc caagctttgg aagacaccac cggaaacaaa gcccagggaa gatgtctcca
481 tgaccagttg tgaacccttt gggaaagaag ggatactgat aaaaattcct gctgttattt
541 cccacagaac agagtctcac gttaaaccag ggaggctcac cgtccttgtg tctgggttgg
601 aaatacatga ctccagttct ttgctcatgc acaggtttga aagagaagac gtggacgaca
661 tcaaggtcca ctcaccttac gaaattagca tccgccagcg gtttattgga aagccagaca
721 tggcctatcg tttgatatct gccaagatgc cagaggttat ccccatttta gaagtgcagt
781 tcagcaagaa gatggagctg ttagaagatg cattggtgct cagaagcgca agaacctctt
841 cccccgcaga gaagagctgc tcagtctggc atgcagcatc tgggctgatg ggccgtaccc
901 tgcaccgtga gccacccgca ggagaccagg agggcacagc actgcacctg cagacaagcc
961 tgccagccct ttctgaggca gatacccagg aactaaccca gatcctgagg aggatgaagg
1021 ggctggccct ggaggccgag agtgagctgg agagacaaga cgaagccctg gatggcgttg
1081 cagcagctgt ggacagggca accttgacca tcgacaagca caacaggcgg atgaagaggc
1141 tgacctaggg gcagaacgtc cctgcattcc tgtctcaccc tgcacatccc gctgagatgg
1201 agggctgggc ggcagtgcca gggctgcaga ggcctgtggc cctccggagt ggtcttcctc
1261 tggatggggc tgctactgtg gggctgcttc tgcaccaggg gcctccccag gtgtgcacca
1321 tgcctgcctc ccacttggct gtccctgctg ctgggcagga cccggccaca tgttctgcgg
1381 atgctgcaga agtgtggacc atggcgggac cccaaggaca cttggcacag gcctggaaga
1441 ggccgccctc gtcttgtctc ggctcccttt catggacaga ctggccttct tagctgtact
1501 ataaatttgt gagtgaagtt agagcccagc tcacttagcc agctcacttt gagggcatcc
1561 tataaacacc caactgttct tttatcgtct cggttttagc caaaagtgaa attagcatga
1621 ctgcatcttt caaacaaaaa tattgatttc tgcttttagg gccccgtttc catccagaaa
1681 taaagggaaa tgctggcttc aaaaaaaaaa aaaaaaaaaa aaaaaaa
//