LOCUS BC001329 1620 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens septin 8, mRNA (cDNA clone IMAGE:3457224), complete
cds.
ACCESSION BC001329
VERSION BC001329.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1620
/db_xref="H-InvDB:HIT000030323"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3457224"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1620
/gene="SEPT8"
/gene_synonym="SEP2"
/db_xref="GeneID:23176"
/db_xref="HGNC:HGNC:16511"
/db_xref="MIM:608418"
CDS 151..927
/gene="SEPT8"
/gene_synonym="SEP2"
/codon_start=1
/product="SEPT8 protein"
/protein_id="AAH01329.1"
/db_xref="GeneID:23176"
/db_xref="HGNC:HGNC:16511"
/db_xref="MIM:608418"
/translation="MKKLDSKVNIIPIIAKADTISKSELHKFKIKIMGELVSNGVQIY
QFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVRARQYPWGVVQVENENHCDF
VKLREMLIRVNMEDLREQTHSRHYELYRRCKLEEMGFQDSDGDSQPFSLQETYEAKRK
EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHLKRVHQEEKRKVEEKRR
ELEEETNAFNRRKAAVEALQSQALHATSQQPLRKDKDKKN"
BASE COUNT 449 a 396 c 428 g 347 t
ORIGIN
1 gactacatcg atgcgcagtt tgaaaattat ctgcaggagg agctgaagat ccgccgctcg
61 ctcttcgact accatgacac aaggatccac gtttgcctct acttcatcac gcccacaggg
121 cactccctga agtctctaga tctagtgacc atgaagaaac tagacagcaa ggtgaacatt
181 attcccatca tcgccaaggc tgacaccatc tccaagagcg agctccacaa gttcaagatc
241 aagatcatgg gcgagttggt cagcaacggg gtccagatct accagttccc cacggatgat
301 gaggctgttg cagagattaa cgcagtcatg aatgcacatc tgccctttgc cgtggtgggc
361 agcaccgagg aggtgaaggt ggggaacaag ctggtccgag cacggcagta cccctgggga
421 gtggtgcagg tggagaatga gaatcactgc gacttcgtga agctgcggga gatgttgatc
481 cgggtgaaca tggaagacct ccgcgagcag acccacagcc ggcactacga gctctaccgg
541 cgctgcaagt tggaggagat gggctttcag gacagcgatg gtgacagcca gcccttcagc
601 ctacaagaga catacgaggc caagaggaag gagttcctaa gtgagctgca gaggaaggag
661 gaagagatga ggcagatgtt tgtcaacaaa gtgaaggaga cagagctgga gctgaaggag
721 aaggaaaggg agctccatga gaagtttgag cacctgaagc gggtccacca ggaggagaag
781 cgcaaggtgg aggaaaagcg ccgggaactg gaggaggaga ccaacgcctt caatcgccgg
841 aaggctgcgg tggaggccct gcagtcgcag gccttgcacg ccacctcgca gcagcccctg
901 aggaaggaca aggacaagaa gaattaacgc acgcacagac ttacatgtca agagtggact
961 ttagactttc atgtgttaag ttgcttgagt tacaccttgt gacccttctc ccataacatg
1021 gtgtgaggac ggactgggag ccggtacaga ctccagtgtt tacagccttg ctttcctccc
1081 accgaccctg gccccaggct gccccgggcc tggcgggcca cccctctcta tgcaaacacg
1141 taaaagccat gaatgctgga atccaaaact gacgaggttt atttttttca gagccagtgg
1201 ctggtcttcc atttacagtg tcactattcc ctgacggagc tgttatgtgc cgctctagcg
1261 aaggccccag ccgggatgct aggcctaatt gttcagcgtg gagatggcaa ctcacgtggt
1321 gccctaggtg cagctgcgtg gtctggtata catgctgcaa aattcaccca gttcccctca
1381 ttttaatttt tctaacctac agcttaattt taataacttt aaaacacttc taaatattta
1441 ttttggcacc agcgtcaaga caaataatat cctctcccat tattttcata agtaacacag
1501 attccctgat ttttaaaaac taaaaataca gctaaacctt tcttatgtat aaagtatgcc
1561 tatcatatac agggagaggt gggtaataaa cttcctgtaa tgacaaaaaa aaaaaaaaaa
//