LOCUS BC001316 2232 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens defective in sister chromatid cohesion 1 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:5528 IMAGE:3454505), complete
cds.
ACCESSION BC001316
VERSION BC001316.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129095.
FEATURES Location/Qualifiers
source 1..2232
/db_xref="H-InvDB:HIT000030315"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5528 IMAGE:3454505"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2232
/gene="DSCC1"
/gene_synonym="DCC1"
/gene_synonym="hDCC1"
/db_xref="GeneID:79075"
/db_xref="HGNC:HGNC:24453"
CDS 115..1296
/gene="DSCC1"
/gene_synonym="DCC1"
/gene_synonym="hDCC1"
/codon_start=1
/product="defective in sister chromatid cohesion 1 homolog
(S. cerevisiae)"
/protein_id="AAH01316.1"
/db_xref="GeneID:79075"
/db_xref="HGNC:HGNC:24453"
/translation="MKRTRDEVDATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFC
LLELEPTLCQQLEDGHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPD
QLKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNS
SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSES
WSFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKICRAAARML
LQNAVKFNLAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDN
QERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSRSSMQNGVKVYNSRRPI
S"
BASE COUNT 684 a 398 c 475 g 675 t
ORIGIN
1 ggcgcgcttt caaacgctca ggtttcctac cttccggctg cttgggaact tctttcttgc
61 ccgccaagcc cgcagccacc cgggcgcggc gggactccta gacccggcgc tgcgatgaag
121 aggacccgcg acgaggtgga tgcgacgctg cagatcgcca agctgaatgc ggccgagctg
181 ctgccggcgg tgcactgcct gggcttcggc cctggggcca gcggcgctgc agccggcgac
241 ttctgcctgc tggagctgga gcccacgctg tgccagcagc tggaggatgg acacagtctt
301 gtgattcgtg gtgataaaga cgagcaagct gtgctgtgca gtaaagacaa aacatacgac
361 ttgaagatag cagacacttc caatatgttg cttttcattc ctggttgtaa aactccggac
421 cagttgaaga aggaagattc acactgtaac attattcaca ctgagatctt tggtttttct
481 aataattatt gggaattaag aagacgtaga cccaagttaa agaagctaaa gaaacttttg
541 atggaaaatc catatgaagg acctgacagt caaaaagaga aggattcaaa tagctcaaaa
601 tatacaactg aagatttgct tgatcaaatt caggcaagtg aggaagaaat aatgacccaa
661 ttacaagttc taaatgcctg taagattgga ggttattgga ggattcttga atttgattat
721 gagatgaaac ttctgaatca tgtaactcag cttgtggatt ctgaatcatg gtcttttggt
781 aaagttcctt tgaacacatg ccttcaggaa ctcggaccat tggagccaga ggaaatgata
841 gaacactgtc ttaaatgtta tgggaagaaa tatgtagatg aaggcgaagt ttattttgag
901 ttggatgctg ataaaatatg tagagcagca gcacgaatgc tacttcagaa tgcggtgaaa
961 ttcaatctcg ctgagtttca agaagtgtgg cagcagagtg ttcctgaagg aatggtaact
1021 agtcttgatc agcttaaggg tttagcgctg gtggatagac actcgagacc agaaatcata
1081 tttttgctga aagtagatga tttacctgag gataatcagg aacgttttaa tagccttttc
1141 tctctaaggg agaagtggac agaagaagat attgctccat atattcaaga tttgtgtgga
1201 gagaagcaaa ccataggtgc attactcact aaatattctc gttcttcgat gcaaaatggt
1261 gttaaagttt ataattcgag aagacccatt tcttaaaaga acaacagtct tttcttcagg
1321 actcaagttg ctttataaag ttgctggata caagaaaaat aacttgtact tttatttctg
1381 acttttagaa acctagtctt ctaaggcatt tttctcctca tcttaagcat tttgaaacta
1441 ctgttatttc ttaaatgtta taggatgtag ctttaaaatt atatttgtac tatgtacaca
1501 gtgtaaacaa ggacaaaaga attctttcct atattatgtc tgaggtctct atgatttatt
1561 taaagtttgg ctttttatat ttaaaatgtc atttctttac ttaggatttg atgttctaat
1621 cattaataca cttaagtttt ccagagaact aaatagtaat agtttcatag aagagaacta
1681 tttattcact taaatatcat ttctcaagtg agtgagttcc cctctacttt tagccttcca
1741 cccaaactgg aagcctctag gtgctatcaa ttatttatat ccatcgttta catccatgaa
1801 attggctgaa taattactcc tctgcctggc gtagacatgt gctttgggaa aaaaacgagt
1861 ttataatcct ataatgaaga atactggcac aggcaatgct cactcgaaaa cttcaagtaa
1921 tttctagttg gttttggaat gcttgataaa gttcctttac agctttattt tcctgatttg
1981 ttttggttta gatcaaagtt caaattaatt ttaacttagc taatgaactc atcaccagga
2041 cagttggagg gggtaggccg aggttaaatg gtccacgttt caaaaatgtt aatggctaat
2101 ccataattaa agaaggttta actgttactg aagtttacaa gttttattgt catgaacatg
2161 aaatacaaac acgatggctt cgaaatgtct ttcaataaat gtttctgcat ttaaaaaaaa
2221 aaaaaaaaaa aa
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