LOCUS BC001306 2326 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens cytoplasmic FMR1 interacting protein 1, mRNA (cDNA
clone IMAGE:3452455), partial cds.
ACCESSION BC001306
VERSION BC001306.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2326)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2326)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001306.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 13.
FEATURES Location/Qualifiers
source 1..2326
/db_xref="H-InvDB:HIT000085983"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3452455"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2326
/gene="CYFIP1"
/gene_synonym="KIAA0068"
/gene_synonym="P140SRA-1"
/gene_synonym="SHYC"
/db_xref="GeneID:23191"
/db_xref="MIM:606322"
CDS <1..1739
/gene="CYFIP1"
/gene_synonym="KIAA0068"
/gene_synonym="P140SRA-1"
/gene_synonym="SHYC"
/codon_start=3
/product="CYFIP1 protein"
/protein_id="AAH01306.2"
/db_xref="GeneID:23191"
/db_xref="MIM:606322"
/translation="HYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAG
SLLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMY
KSLELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAP
YGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKA
LNLAYSSIYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKT
LMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLL
IEQSLSLEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLG
TPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECV
EFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHL
LKVQKHDGKDEIIKNVPLKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRC
FQPPIHQSLASS"
BASE COUNT 592 a 568 c 565 g 601 t
ORIGIN
1 cccactacgc gctcaccagg ttcaacaagc agttcctcta cgacgaaatt gaggccgagg
61 tgaatctatg ttttgaccaa tttgtttaca agctagcaga ccagatattt gcctattata
121 aggttatggc aggaagtttg cttcttgata aacggttacg atcagaatgc aagaatcagg
181 gagccacgat ccacctcccg ccgtctaacc gctacgagac gctgctgaag cagaggcatg
241 tgcagctcct cggcagatca atagacctca atcgtctgat cacccagcgc gtctcagcag
301 ccatgtataa gtccctagaa ctggcgattg gacgatttga aagtgaagat ttgacctcca
361 tagttgagct ggatggcctg ttggaaatca accgcatgac ccacaagctg ctgagccggt
421 acctgacgct ggacagcttc gacgccatgt tccgggaggc caaccacaac gtgtcagcgc
481 cctacgggag gatcaccctg cacgtcttct gggagctcaa ctatgacttc ctgcccaact
541 actgctacaa cggctctacc aaccggtttg ttcggacagt gttaccattt tctcaggaat
601 ttcaaagaga taagcagcct aatgcacagc ctcagtatct gcatggatcc aaggctttga
661 acttggccta ctccagcatt tacggcagct accggaactt cgtgggacct ccacactttc
721 aagtcatctg ccggcttctc ggctaccagg gtatcgccgt ggtcatggag gagctgctga
781 aggtcgtcaa gagcctgctg caaggcacaa tcctgcagta cgtgaagacg ctgatggagg
841 tgatgcccaa gatctgccgc ctgccccggc acgagtacgg ctctcctggt atcctggagt
901 tcttccacca ccagctgaag gacatcgtgg agtacgcaga gctgaagacg gtgtgcttcc
961 agaacctgcg ggaggtgggg aacgccatcc tcttctgcct gctcatcgag cagagcctgt
1021 ctttagaaga agtgtgtgac ctgctgcacg cggctccttt ccagaacatc ttgccgcgag
1081 tccatgtgaa agagggggag agacttgatg ccaaaatgaa aagactagaa tcaaagtacg
1141 ccccgctgca tcttgtccca ctgattgaaa gactggggac ccctcagcaa attgccatcg
1201 caagagaggg ggacctgctg acaaaggagc gcctctgctg cggcctgtcc atgtttgagg
1261 tcatcctgac acggatccgg agctttctgg atgaccccat ctggcgcggg cctctgccca
1321 gcaatggggt catgcatgtg gacgagtgtg tggagtttca cagactgtgg agtgccatgc
1381 agtttgtcta ctgcattccc gtggggacac acgagttcac agtcgagcag tgctttggtg
1441 atgggctaca ctgggctggc tgtatgatca tcgtacttct tgggcagcag cggcgttttg
1501 ctgtgctgga tttctgctac catctactta aagtccagaa acatgatggc aaagatgaga
1561 ttattaaaaa tgtgcctttg aagaagatgg tggagagaat tcgcaagttc cagattctca
1621 atgatgagat catcaccatc ctggataagt acctgaagtc aggcgacggg gagggcacgc
1681 cagtggagca tgtgcgctgc ttccagccgc ccatccacca gtccctcgcc agcagctgag
1741 ggcacgcgct gcactccgta actcaacatg gcatgccttt ctctccgtaa actatttagt
1801 gagattttta gggactattt ttcagtatct ctgtacctgt taaagggggt gcttttcgat
1861 ctaaaaactt aattttataa aattgactta tttttctaga ctaaaattgt atatgctttt
1921 ggtaattagg aactcttgag aatattggct gctgattgtt gccatcacgt tcctacaaaa
1981 ttgtttttct atgggatgtt ctggcagctg tgtcataaaa tgctgctggg ttcattcatt
2041 cattccataa gaaacttaat accagcaaat gcattaaatc ccttgccagt taccattaac
2101 tataactatt tagcttttgt ttagggatct ttctgatggt cttttatgag caatcttagt
2161 tgtaagtcat tgttcccatc ccttttttgt gtgtttcaga aaatagtgaa cttgattccc
2221 ctgcttccac taaatccagt tgtgacaaaa tctaacgtga catcagatcg aaaggttata
2281 gaaataaaac taatgagatc taaaaaaaaa aaaaaaaaaa aaaaaa
//