LOCUS BC001301 1805 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, beta, mRNA (cDNA clone MGC:5475 IMAGE:3451917),
complete cds.
ACCESSION BC001301
VERSION BC001301.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5016088.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000030304"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5475 IMAGE:3451917"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1805
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
CDS 68..1195
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/codon_start=1
/product="actin, beta"
/protein_id="AAH01301.1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
/translation="MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
BASE COUNT 399 a 534 c 452 g 420 t
ORIGIN
1 cgccccgcga gcacagagcc tcgcctttgc cgatccgccg cccgtccaca cccgccgcca
61 gctcaccatg gatgatgata tcgccgcgct cgtcgtcgac aacggctccg gcatgtgcaa
121 ggccggcttc gcgggcgacg atgccccccg ggccgtcttc ccctccatcg tggggcgccc
181 caggcaccag ggcgtgatgg tgggcatggg tcagaaggat tcctatgtgg gcgacgaggc
241 ccagagcaag agaggcatcc tcaccctgaa gtaccccatc gagcacggca tcgtcaccaa
301 ctgggacgac atggagaaaa tctggcacca caccttctac aatgagctgc gtgtggctcc
361 cgaggagcac cccgtgctgc tgaccgaggc ccccctgaac cccaaggcca accgcgagaa
421 gatgacccag atcatgtttg agaccttcaa caccccagcc atgtacgttg ctatccaggc
481 tgtgctatcc ctgtacgcct ctggccgtac cactggcatc gtgatggact ccggtgacgg
541 ggtcacccac actgtgccca tctacgaggg gtatgccctc ccccatgcca tcctgcgtct
601 ggacctggct ggccgggacc tgactgacta cctcatgaag atcctcaccg agcgcggcta
661 cagcttcacc accacggccg agcgggaaat cgtgcgtgac attaaggaga agctgtgcta
721 cgtcgccctg gacttcgagc aagagatggc cacggctgct tccagctcct ccctggagaa
781 gagctacgag ctgcctgacg gccaggtcat caccattggc aatgagcggt tccgctgccc
841 tgaggcactc ttccagcctt ccttcctggg catggagtcc tgtggcatcc acgaaactac
901 cttcaactcc atcatgaagt gtgacgtgga catccgcaaa gacctgtacg ccaacacagt
961 gctgtctggc ggcaccacca tgtaccctgg cattgccgac aggatgcaga aggagatcac
1021 tgccctggca cccagcacaa tgaagatcaa gatcattgct cctcctgagc gcaagtactc
1081 cgtgtggatc ggcggctcca tcctggcctc gctgtccacc ttccagcaga tgtggatcag
1141 caagcaggag tatgacgagt ccggcccctc catcgtccac cgcaaatgct tctaggcgga
1201 ctatgactta gttgcgttac accctttctt gacaaaacct aacttgcgca gaaaacaaga
1261 tgagattggc atggctttat ttgttttttt tgttttgttt tggttttttt tttttttttg
1321 gcttgactca ggatttaaaa actggaacgg tgaaggtgac agcagtcggt tggagcgagc
1381 atcccccaaa gttcacaatg tggccgagga ctttgattgc acattgttgt ttttttaata
1441 gtcattccaa atatgagatg cgttgttaca ggaagtccct tgccatccta aaagccaccc
1501 cacttctctc taaggagaat ggcccagtcc tctcccaagt ccacacaggg gaggtgatag
1561 cattgctttc gtgtaaatta tgtaatgcaa aattttttta atcttcgcct taatactttt
1621 ttattttgtt ttattttgaa tgatgagcct tcgtgccccc ccttccccct tttttgtccc
1681 ccaacttgag atgtatgaag gcttttggtc tccctgggag tgggtggagg cagccagggc
1741 ttacctgtac actgacttga gaccagttga ataaaagtgc acaccttaaa aaaaaaaaaa
1801 aaaaa
//