LOCUS BC001297 2082 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KDEL (Lys-Asp-Glu-Leu) containing 1, mRNA (cDNA clone
MGC:5302 IMAGE:3456869), complete cds.
ACCESSION BC001297
VERSION BC001297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2082)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2082)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129085.
FEATURES Location/Qualifiers
source 1..2082
/db_xref="H-InvDB:HIT000030301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5302 IMAGE:3456869"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2082
/gene="KDELC1"
/gene_synonym="EP58"
/gene_synonym="KDEL1"
/gene_synonym="MGC5302"
/db_xref="GeneID:79070"
/db_xref="HGNC:HGNC:19350"
CDS 338..1846
/gene="KDELC1"
/gene_synonym="EP58"
/gene_synonym="KDEL1"
/gene_synonym="MGC5302"
/codon_start=1
/product="KDEL (Lys-Asp-Glu-Leu) containing 1"
/protein_id="AAH01297.1"
/db_xref="GeneID:79070"
/db_xref="HGNC:HGNC:19350"
/translation="MFGTLLLYCFFLATVPALAETGGERQLSPEKSEIWGPGLKADVV
LPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYR
MYASYKNLKVEVKFQGQHVAKSPYILKGPVYHENCDCPLQDSAAWLREMNCPETIAQI
QRDLAHFPAVDPEKIAVEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAIL
LSLTRKVKMPDVELFVNLGDWPLEKKKSNSNIHPIFSWCGSTDSKDIVMPTYDLTDSV
LETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAF
TNFFFFKHDENLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLPYLLVGDSVVLKQDS
IYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKDHDEEAKKIAKAGQEFARNNLMGD
DIFCYYFKLFQEYANLQVSEPQIREGMKRVEPQTEDDLFPCTCHRKKTKDEL"
BASE COUNT 616 a 451 c 483 g 532 t
ORIGIN
1 cttggctgga acctgagacg gattcgctcc caaatgatgc tccagtggct ggagcaactc
61 aagttcatca ttgtcctgag agagaggagc agcgcggttc tcggccggga cagcagaacg
121 ccaggggacc ctcacctggg cgcgccgggg cacgggcttt gattgtcctg gggtcgcgga
181 gacccgcgcg cctgccctgc acgccgggcg gcaacctttg cagtcgcgtt ggctgctgcg
241 atcggccggc gggtccctgc cgaaggctcg gctgcttctg tccacctctt acacttcttc
301 atttatcggt ggatcatttc gagagtccgt cttgtaaatg tttggcactt tgctacttta
361 ttgcttcttt ctggcgacag ttccagcact cgccgagacc ggcggagaaa ggcagctgag
421 cccggagaag agcgaaatat ggggacccgg gctaaaagca gacgtcgtcc ttcccgcccg
481 ctatttctat attcaggcag tggatacatc agggaataaa ttcacatctt ctccaggcga
541 aaaggtcttc caggtgaaag tctcagcacc agaggagcaa ttcactagag ttggagtcca
601 ggttttagac cgaaaagatg ggtccttcat agtaagatac agaatgtatg caagctacaa
661 aaatctgaag gtggaagtta aattccaagg gcaacatgtg gccaaatccc catatatttt
721 aaaagggccg gtttaccatg agaactgtga ctgtcctctg caagatagtg cagcctggct
781 acgggagatg aactgccctg aaaccattgc tcagattcag agagatctgg cacatttccc
841 tgctgtggat ccagaaaaga ttgcagtaga aatcccaaaa agatttggac agaggcagag
901 cctatgtcac tacaccttaa aggataacaa ggtttatatc aagactcatg gtgaacatgt
961 aggttttaga attttcatgg atgccatact actttctttg actagaaagg tgaagatgcc
1021 agatgtggag ctctttgtta atttgggaga ctggcctttg gaaaaaaaga aatccaattc
1081 aaacatccat ccgatctttt cctggtgtgg ctccacagat tccaaggata tcgtgatgcc
1141 tacgtacgat ttgactgatt ctgttctgga aaccatgggc cgggtaagtc tggatatgat
1201 gtccgtgcaa gctaacacgg gtcctccctg ggaaagcaaa aattccactg ccgtctggag
1261 agggcgagac agccgcaaag agagactcga gctggttaaa ctcagtagaa aacacccaga
1321 actcatagac gctgctttca ccaacttttt cttctttaaa cacgatgaaa acctgtatgg
1381 tcccattgtg aaacatattt cattttttga tttcttcaag cataagtatc aaataaatat
1441 cgatggcact gtagcagctt atcgcctgcc atatttgcta gttggtgaca gtgttgtgct
1501 gaagcaggat tccatctact atgaacattt ttacaatgag ctgcagccct ggaaacacta
1561 cattccagtt aagagcaacc tgagcgatct gctagaaaaa cttaaatggg cgaaagatca
1621 cgatgaagag gccaaaaaga tagcaaaagc aggacaagaa tttgcaagaa ataatctcat
1681 gggcgatgac atattctgtt attatttcaa acttttccag gaatatgcca atttacaagt
1741 gagtgagccc caaatccgag agggcatgaa aagggtagaa ccacagactg aggacgacct
1801 cttcccttgt acttgccata ggaaaaagac caaagatgaa ctctgatatg caaaataact
1861 tctattagaa taatggtgct ctgaagactc ttcttaacta aaaagaagaa tttttttaag
1921 tattaattcc atggacaata taaaatctgt gtgattgttt gcagtatgaa gacacatttc
1981 tacttatgca gtattctcat gactgtactt taaagtacat ttttagaatt ttataataaa
2041 accaccttta ttttaaagga aaaaaaaaaa aaaaaaaaaa aa
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