LOCUS BC001289 1634 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Sjogren syndrome antigen B (autoantigen La), mRNA
(cDNA clone MGC:5194 IMAGE:3454454), complete cds.
ACCESSION BC001289
VERSION BC001289.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543654.
FEATURES Location/Qualifiers
source 1..1634
/db_xref="H-InvDB:HIT000030295"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5194 IMAGE:3454454"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1634
/gene="SSB"
/gene_synonym="La"
/gene_synonym="LARP3"
/db_xref="GeneID:6741"
/db_xref="HGNC:HGNC:11316"
/db_xref="MIM:109090"
CDS 90..1316
/gene="SSB"
/gene_synonym="La"
/gene_synonym="LARP3"
/codon_start=1
/product="Sjogren syndrome antigen B (autoantigen La)"
/protein_id="AAH01289.1"
/db_xref="GeneID:6741"
/db_xref="HGNC:HGNC:11316"
/db_xref="MIM:109090"
/translation="MAENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDE
GWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTD
EYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDS
IESAKKFVETPGQKYKETDLLILFKDDYFAKKNEERKQNKVEAKLRAKQEQEAKQKLE
EDAEMKSLEEKIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFK
EKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGR
RFKGKGKGNKAAQPGSGKGKVQFQGKKTKFASDDEHDEHDENGATGPVKRAREETDKE
EPASKQQKTENGAGDQ"
BASE COUNT 635 a 227 c 363 g 409 t
ORIGIN
1 cggcggcgct gggaggtgga gtcgttgctg ttgctgtttg tgagcctgtg gcgcggcttc
61 tgtgggccgg aaccttaaag atagccgcaa tggctgaaaa tggtgataat gaaaagatgg
121 ctgccctgga ggccaaaatc tgtcatcaaa ttgagtatta ttttggcgac ttcaatttgc
181 cacgggacaa gtttctaaag gaacagataa aactggatga aggctgggta cctttggaga
241 taatgataaa attcaacagg ttgaaccgtc taacaacaga ctttaatgta attgtggaag
301 cattgagcaa atccaaggca gaactcatgg aaatcagtga agataaaact aaaatcagaa
361 ggtctccaag caaaccccta cctgaagtga ctgatgagta taaaaatgat gtaaaaaaca
421 gatctgttta tattaaaggc ttcccaactg atgcaactct tgatgacata aaagaatggt
481 tagaagataa aggtcaagta ctaaatattc agatgagaag aacattgcat aaagcattta
541 agggatcaat ttttgttgtg tttgatagca ttgaatctgc taagaaattt gtagagaccc
601 ctggccagaa gtacaaagaa acagacctgc taatactttt caaggacgat tactttgcca
661 aaaaaaatga agaaagaaaa caaaataaag tggaagctaa attaagagct aaacaggagc
721 aagaagcaaa acaaaagtta gaagaagatg ctgaaatgaa atctctagaa gaaaagattg
781 gatgcttgct gaaattttcg ggtgatttag atgatcagac ctgtagagaa gatttacaca
841 tacttttctc aaatcatggt gaaataaaat ggatagactt cgtcagagga gcaaaagagg
901 ggataattct atttaaagaa aaagccaagg aagcattggg taaagccaaa gatgcaaata
961 atggtaacct acaattaagg aacaaagaag tgacttggga agtactagaa ggagaggtgg
1021 aaaaagaagc actgaagaaa ataatagaag accaacaaga atccctaaac aaatggaagt
1081 caaaaggtcg tagatttaaa ggaaaaggaa agggtaataa agctgcccag cctgggtctg
1141 gtaaaggaaa agtacagttt cagggcaaga aaacgaaatt tgctagtgat gatgaacatg
1201 atgaacatga tgaaaatggt gcaactggac ctgtgaaaag agcaagagaa gaaacagaca
1261 aagaagaacc tgcatccaaa caacagaaaa cagaaaatgg tgctggagac cagtagttta
1321 gtaaaccaat tttttattca ttttaaatag gttttaaacg acttttgttt gcggggcttt
1381 taaaaggaaa accgaattag gtccacttca atgtccacct gtgagaaagg aaaaattttt
1441 ttgttgttta acttgtcttt ttgttatgca aatgagattt ctttgaatgt attgttctgt
1501 ttgtgttatt tcagatgatt caaatatcaa aaggaagatt cttccattaa attgcctttg
1561 taatatgaga atgtattagt acaaactaac taataaaata tatactatat gaaaagagca
1621 aaaaaaaaaa aaaa
//