LOCUS BC001286 1760 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dCMP deaminase, mRNA (cDNA clone MGC:5160
IMAGE:3458999), complete cds.
ACCESSION BC001286
VERSION BC001286.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61742818.
FEATURES Location/Qualifiers
source 1..1760
/db_xref="H-InvDB:HIT000030292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5160 IMAGE:3458999"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1760
/gene="DCTD"
/db_xref="GeneID:1635"
/db_xref="HGNC:HGNC:2710"
/db_xref="MIM:607638"
CDS 50..586
/gene="DCTD"
/codon_start=1
/product="dCMP deaminase"
/protein_id="AAH01286.1"
/db_xref="GeneID:1635"
/db_xref="HGNC:HGNC:2710"
/db_xref="MIM:607638"
/translation="MSEVSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNS
ENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNAIMNKNLTDVKGCS
MYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCS
KIVIDFDSINSRPSQKLQ"
BASE COUNT 457 a 402 c 447 g 454 t
ORIGIN
1 cggggacgag caccggcctg cgcgcggagc cggcaccgga tgacccaaca tgagtgaagt
61 ttcctgcaag aaacgggacg actatttgga atggccagag tattttatgg ctgtggcctt
121 cttatcagca cagagaagca aagatccaaa ttcccaggtc ggcgcctgca tcgtgaattc
181 agaaaacaag attgtcggga ttgggtacaa tgggatgcca aatgggtgca gtgatgacgt
241 gttgccttgg agaaggacag cagagaataa gctggacacc aaatacccgt acgtgtgcca
301 tgcggagctg aatgccatca tgaacaaaaa tttgaccgat gtgaaaggct gtagtatgta
361 tgtcgccttg ttcccttgta atgaatgcgc taagctcatc atccaggcag gtataaaaga
421 agtgattttc atgtctgata aataccatga tagtgacgag gcaactgctg cgaggctcct
481 gtttaatatg gccggggtga cattccggaa attcataccg aagtgcagca agattgtcat
541 tgactttgat tcaattaaca gcagaccgag tcaaaagctt cagtgagtta catctcattc
601 aatctccaga agattgggat tatcgtcttc taagaggttg ctaatgcctt tcatcttgaa
661 gttacacata acttcttact agccagtatg gcaaaagtag gcatctaaag aatataaagc
721 ctcaaatctt ccttactgtc tctcttgtca catggaatct acatgtgttt gaactattgc
781 tttaggattt aaaatagggg agcctgtggt ggcctggtgc acagggctag aacgagagtg
841 cctccccttc ttgtgtcctg gctggctggg atgctggtgg ctcttcagag gagcatcagc
901 tgtctgtcat ctgctgcgat ccggcagcct ctcttcactg ctacatgtgc tggaaggaca
961 aataaataat tgtggttgtg ttcttaatgg ggacgagcag acacactgat ctgaacatct
1021 ggcccaagtg aagcatggca tatagtgccc ttggaagaaa attaggcctc aaatgacagt
1081 agcattgaag tgtttgctgc agagttgagg gaaaccccca gccaccctcc cggaatccga
1141 gatagggtgg cacatctgtc ctgacagacg aggagtgtaa ctgaaccagg aatatttcct
1201 ccattcctgc tctcccactg cacacagggt ggtggcacat tatccctctg gggggtgggg
1261 acgcctgttg ttttggctca atttgggttt gttggtcaca tggagctctt ccatttcgtt
1321 tagctgaata atgagttgtt cctagaggag acagcctgtc tctccttgtt gcccccaaag
1381 cccatgccct gccgtggtgg cagctggggc tgtggatggg aggggtcccc aacatggatg
1441 tgttgcccct cctccgcatg ccaacgcagt tcatgtacaa ggcccctctg caactggaga
1501 gaaaattaat tcctatcccg tgagtggatt gtgagaaatt ccacccacgt ggagacagct
1561 tactgcagca ctgttggtgt tcggagctct tctgtgccct ggctccatgc tttcacctac
1621 acaagcatca ccttcctaat caccgcgggg cggggagcgt gtggctgtgc cccttctctt
1681 taatctcatt taatttttat taaacatgct cagtacctgt gttgaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa
//