LOCUS BC001277 1723 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
retention receptor 3, mRNA (cDNA clone MGC:5099 IMAGE:3462392),
complete cds.
ACCESSION BC001277
VERSION BC001277.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1723)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8051612.
FEATURES Location/Qualifiers
source 1..1723
/db_xref="H-InvDB:HIT000030283"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5099 IMAGE:3462392"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1723
/gene="KDELR3"
/gene_synonym="ERD2L3"
/db_xref="GeneID:11015"
/db_xref="HGNC:HGNC:6306"
CDS 150..794
/gene="KDELR3"
/gene_synonym="ERD2L3"
/codon_start=1
/product="KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum
protein retention receptor 3"
/protein_id="AAH01277.1"
/db_xref="GeneID:11015"
/db_xref="HGNC:HGNC:6306"
/translation="MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVF
TTRYLDLFTNFISIYNTVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPV
IGLSFLENYSFTLLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRA
LYLANWIRRYQTENFYDQIAVVSGVVQTIFYCDFFYLYVTKVLKGKKLSLPMPI"
BASE COUNT 479 a 407 c 359 g 478 t
ORIGIN
1 ggcgcgcggg tgcgatcgcg gagctgtgag gcgcaggcag ggctctgggg cacctagaga
61 ccggggccgg agacgtggca gccgccctgc ccgccagaaa gtttcctaga agtttgctgg
121 gcgcgggcgc acgactgact ggctggacca tgaacgtgtt ccgaatcctc ggcgacctga
181 gccacctcct ggccatgatc ttgctgctgg ggaagatctg gaggtccaag tgctgcaagg
241 gcatctctgg gaagagccag atcctgtttg ctctcgtctt caccaccagg tacctggacc
301 tgttcaccaa cttcatctcc atctacaaca cagtaatgaa ggtggttttt ctcctctgtg
361 cctatgttac agtgtacatg atatatggga aattccgtaa aacttttgac agtgagaatg
421 acacattccg cctggagttt cttctggtcc cagtcattgg cctttccttc cttgaaaact
481 acagtttcac tctgctggag atcctctgga ctttctctat ctatctggaa tcagtggcta
541 tcctgcccca gctcttcatg atcagcaaga ctggagaggc tgagaccata actactcact
601 acctgttctt tctgggtctg taccgggcac tctacctggc taactggatc aggcggtacc
661 agactgagaa tttctatgac caaattgcag tcgtgtctgg agtagtacaa accatcttct
721 actgtgactt cttctacttg tatgtgacca aagtccttaa gggaaagaag ttaagtcttc
781 caatgccaat ctgaggacct tcagagacag tctacgcctt aacaagcaca tgaaggaaac
841 tattttgaat gttctctttg gcaacttatc cataatttgg gatcaaatgt taaaaccaga
901 aaagtgttta gtgtggattt cagcaaaacc tgatcatccc acccagaaga ccttctcatc
961 aatagatcgc ccttaaagac ccattgtaag gtcataaaaa acctcggcca actgcacaaa
1021 gatggtgcct cactgcaaca agaaacctta aggtgtctta ccgacgaaat aaaaaacata
1081 aatgattgtt ctccaaggcc tgagggcaag actcatgatg agcaagtcaa ccccaatctg
1141 gaacaatgtc cctcctctta gaatgtccca actaaagacc agttaaaata ttagggtacg
1201 ttcttgtgaa tttccacttt ccaggtagat gaccaaattt aggtggtcaa gatataaagg
1261 tgacagctag ttttaagtgt gaaacttatt tcactttcac actgccttca ggccagaagc
1321 aaaccaaatt taccaggttt ggctggagga gttttgtgac tcatctttta ctggtttgaa
1381 ttttttcaaa ccagtggctg atacctgcct tgtacttagt accttaatac caataaccta
1441 atggtactta ggcgagtacc atttgcacaa tcactgtttt acttatgagc agatacagat
1501 atatccaaac ccttacctac taggtatcct gctagggttt tcaattccaa ttcttgtatt
1561 aagttttttc ctttcagttt taggtgcgaa agtaatcagt caatccaata tcccccatct
1621 ttgtcttgaa acaaaaactg ttttaagacg tctacgttga attattcaga gaattaagca
1681 ataaaagctc acaccttatt gtcaaaaaaa aaaaaaaaaa aaa
//