LOCUS BC001244 1625 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens ankyrin repeat and SOCS box-containing 9, mRNA (cDNA
clone MGC:4954 IMAGE:3462727), complete cds.
ACCESSION BC001244
VERSION BC001244.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13443013.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000030252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4954 IMAGE:3462727"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1625
/gene="ASB9"
/gene_synonym="DKFZp564L0862"
/gene_synonym="FLJ20636"
/gene_synonym="MGC4954"
/db_xref="GeneID:140462"
CDS 178..936
/gene="ASB9"
/gene_synonym="DKFZp564L0862"
/gene_synonym="FLJ20636"
/gene_synonym="MGC4954"
/codon_start=1
/product="ASB9 protein"
/protein_id="AAH01244.1"
/db_xref="GeneID:140462"
/translation="MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAA
IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW
HTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRAYGGNIDHKISHLGTP
LYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAK
NAEGKRPVELVPPESPLAQLFLEREGASLPKPKP"
misc_feature 280..738
/gene="ASB9"
/gene_synonym="DKFZp564L0862"
/gene_synonym="FLJ20636"
/gene_synonym="MGC4954"
/note="Arp; Region: FOG: Ankyrin repeat [General function
prediction only]"
/db_xref="CDD:COG0666"
BASE COUNT 423 a 354 c 403 g 445 t
ORIGIN
1 gtagcactca gattaccctg cctgctctgt gctttgctgc agaccatttg accagaacgt
61 gtgcagctca gccagccaca gaactggaat ttttcaggag cagggggagc atggagtttg
121 gactttgctg agcaactgaa gtggagcgca gagcttgctc gcttaggaga gagcatcatg
181 gatggcaaac aagggggcat ggatgggagc aagcccgcgg ggccaaggga ctttcctggc
241 atcaggcttc tttcaaaccc attgatgggc gatgctgtgt ctgattggtc tcctatgcat
301 gaagctgcaa tccacggaca tcagctgtct ctgaggaacc tcatcagcca ggggtgggct
361 gtgaacatca tcacggcaga tcatgtttcc ccactccatg aagcctgtct tggaggtcat
421 ctctcttgtg tgaagatttt attaaagcat ggagctcagg tgaatggtgt gacagcagac
481 tggcacactc cactgtttaa tgcttgtgtc agcggcagct gggattgtgt gaatttgctt
541 ctgcagcacg gagccagcgt tcaacctgag agtgatctgg catcccccat ccatgaagct
601 gctaggagag cttatggggg caacattgac cataagatca gccacctggg cactccactc
661 tatttggctt gtgaaaacca acagagagcc tgtgtcaaga agcttctgga gtcaggagcg
721 gacgtgaacc aagggaaagg tcaggattcc ccacttcatg cagtggccag gacagccagt
781 gaagagctgg cctgcctgct catggatttt ggagcggaca cccaggccaa gaatgctgaa
841 ggcaaacgtc ctgtggagct ggtgcctcca gagagcccct tggcccagct cttcttggag
901 agagaaggtg cttctttgcc aaaacctaag ccctaatctg ttgacatccc ttggggctct
961 agtagaaggg cccccttctt tgatgcagtt atgccgcctt agaattcgga agtgttttgg
1021 aatccagcag catcataaga taaccaaact cgtcctccca gaggatctga aacagtttct
1081 cctacatctt taaatgcatc tagggaatgg attcacaaac gatgtgaaaa cattattgag
1141 tgttgtagcc actagaattt taaaatcaag ttggatttat agagtttgac tagttttttc
1201 gattagattt gtatttgtta taaacttgtt tatggagttt gactaatttt ttctattcaa
1261 tttgtatttg ttaaactcaa gccagggttg aaagacactg catacgtttg tattattagt
1321 tagaaggcat gaagactttt ttccctgcat ggagagtgtc ataagttatt gttttgcata
1381 tctactgcat gccaagcact ttctgcatca tctaatttag ccctcacagc cactgggtca
1441 agatgtccaa ttttccagag taaggataga ggagtcaaat tcaaatacag gttttctgac
1501 attaacttat gtgatgactt gatcgaggca ggcttttcca gcatcactgt cctggttcca
1561 tctctgctat atgggaatga aaataaagaa acatatttct tggcttgtct aaaaaaaaaa
1621 aaaaa
//