LOCUS BC001243 2392 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens asparagine synthetase domain containing 1, mRNA (cDNA
clone MGC:4948 IMAGE:3453136), complete cds.
ACCESSION BC001243
VERSION BC001243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9506696.
FEATURES Location/Qualifiers
source 1..2392
/db_xref="H-InvDB:HIT000030251"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4948 IMAGE:3453136"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2392
/gene="ASNSD1"
/gene_synonym="FLJ20752"
/gene_synonym="NBLA00058"
/gene_synonym="NS3TP1"
/db_xref="GeneID:54529"
/db_xref="HGNC:HGNC:24910"
CDS 340..2271
/gene="ASNSD1"
/gene_synonym="FLJ20752"
/gene_synonym="NBLA00058"
/gene_synonym="NS3TP1"
/codon_start=1
/product="asparagine synthetase domain containing 1"
/protein_id="AAH01243.1"
/db_xref="GeneID:54529"
/db_xref="HGNC:HGNC:24910"
/translation="MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNSSKQLLKSDVN
YQCLFSAHVLHLRGVLTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYLSSC
KNESEILSLFSEVQGPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLSSVG
TQTSGLANQWQEVPASGLFRIDLKSTVISRCIILQLYPWKYISRENIIEENVNSLSQI
SADLPAFVSVVANEAKLYLEKPVVPLNMMLPQAALETHCSNISNVPPTREILQVFLTD
VHMKEVIQQFIDVLSVAVKKRVLCLPRDENLTANEVLKTCDRKANVAILFSGGIDSMV
IATLADRHIPLDEPIDLLNVAFIAEEKTMPTTFNREGNKQKNKCEIPSEEFSKDVAAA
AADSPNKHVSVPDRITGRAGLKELQAVSPSRIWNFVEINVSMEELQKLRRTRICHLIR
PLDTVLDDSIGCAVWFASRGIGWLVAQEGVKSYQSNAKVVLTGIGADEQLAGYSRHRV
RFQSHGLEGLNKEIMMELGRISSRNLGRDDRVIGDHGKEARFPFLDENVVSFLNSLPI
WEKANLTLPRGIGEKLLLRLAAVELGLTASALLPKRAMQFGSRIAKMEKINEKASDKC
GRLQIMSLENLSIEKETKL"
BASE COUNT 767 a 411 c 505 g 709 t
ORIGIN
1 atcccgcgtg tcttgcgctc ggtggaaatg cccagccgag ggacgcgacc agaggacagc
61 tctgtgctga tccccaccga caattcgacc ccacacaagg aggatctaag cagcaagatt
121 aaagaacaaa aaattgtggt ggatgaactt tctaacctta agaagaatag gaaagtatat
181 aggcaacaac agaacagcaa tatattcttt cttgcagacc gaacagaaat gctgtctgag
241 agcaagaata tattggatga actgaaaaaa gaataccaag aaatagaaaa cttagacaag
301 accaaaatca agaaatagtc aacctgattt cacataacaa tgtgtggcat ttgttgttct
361 gtaaactttt ctgctgagca tttcagtcaa gatttaaaag aggacttact atataatctt
421 aaacagcggg gacccaatag tagtaaacaa ttgttaaagt ctgatgttaa ctaccagtgt
481 ttattttctg ctcacgtcct acacttgagg ggtgttttga ctacccagcc tgtggaagat
541 gaaagaggca atgtgtttct atggaatgga gaaattttta gtggaataaa ggttgaagct
601 gaagagaatg acactcaaat tttgtttaat tatctttcct cctgtaagaa tgaatctgag
661 attttgtcac tcttctcaga agtacaaggt ccctggtcat ttatatatta tcaagcatct
721 agtcattatt tatggtttgg tagggatttt tttggtcgcc gtagcttgct ttggcatttt
781 agtaatttgg gcaagagttt ctgcctctct tcagttggca cccaaacatc tggattggca
841 aatcagtggc aagaagttcc agcatctgga cttttcagaa ttgatcttaa gtctactgtc
901 atttccagat gcattatttt acaactgtat ccttggaaat atatttctag ggagaatatt
961 attgaagaaa atgttaatag cctgagtcaa atttcagcag acttaccagc atttgtatca
1021 gtggtagcaa atgaagccaa actgtatctt gaaaaacctg ttgttccttt aaatatgatg
1081 ttgccacaag ctgcactgga gactcattgc agtaatattt ccaatgtgcc acctacaaga
1141 gagatacttc aagtctttct tactgatgta cacatgaagg aagtaattca gcagttcatt
1201 gatgtcctga gtgtagcagt caagaaacgt gtcttgtgtt tacctaggga tgaaaacctg
1261 acagcaaatg aagttttgaa aacgtgtgat aggaaagcaa atgttgcaat cctgttttct
1321 gggggcattg attccatggt tattgcaacc cttgctgacc gtcatattcc tttagatgaa
1381 ccaattgatc ttcttaatgt agctttcata gctgaagaaa agaccatgcc aactaccttt
1441 aacagagaag ggaataaaca gaaaaataaa tgtgaaatac cttcagaaga attctctaaa
1501 gatgttgctg ctgctgctgc tgacagtcct aataaacatg tcagtgtacc agatcgaatc
1561 acaggaaggg cgggactaaa ggaactacaa gctgttagcc cttcccgaat ttggaatttt
1621 gttgaaatta atgtttctat ggaagaactg cagaaattaa gaagaactcg aatatgtcac
1681 ttaattcggc cattggatac agttttggat gatagcattg gctgtgcagt ctggtttgct
1741 tctagaggaa ttggttggtt agtggcccag gaaggagtga aatcctatca gagcaatgca
1801 aaggtagttc tcactggaat tggtgcagat gagcaacttg caggttattc tcgtcatcgt
1861 gtccgctttc agtcgcatgg gctggaagga ttgaataagg aaataatgat ggaactgggt
1921 cgaatttctt ctagaaatct tggtcgtgat gacagagtta ttggtgatca tggaaaagaa
1981 gcaagatttc ctttcctgga tgaaaatgtt gtctcctttc taaattctct gccgatttgg
2041 gaaaaagcaa acttgacttt accccgagga attggtgaaa aattactttt acgccttgca
2101 gctgtggaac ttggtcttac agcctctgct cttctgccca aacgggccat gcagtttgga
2161 tcaagaattg caaaaatgga aaaaattaat gaaaaggcat ctgataaatg tggacggctc
2221 caaatcatgt ccttagaaaa tctttctatt gaaaaggaga ctaaattgta atgtgattca
2281 caatgtaaca atataaaaat aagtttttat ataattatat aaaagtaaga tactctgctg
2341 ctttactatt gtataatata gtagttttaa agttcaaaaa aaaaaaaaaa aa
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