LOCUS BC001238 2383 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, mRNA (cDNA
clone MGC:4933 IMAGE:3452935), complete cds.
ACCESSION BC001238
VERSION BC001238.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327633.
FEATURES Location/Qualifiers
source 1..2383
/db_xref="H-InvDB:HIT000030246"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4933 IMAGE:3452935"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2383
/gene="DDX18"
/gene_synonym="MrDb"
/db_xref="GeneID:8886"
/db_xref="HGNC:HGNC:2741"
/db_xref="MIM:606355"
CDS 29..2041
/gene="DDX18"
/gene_synonym="MrDb"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
/protein_id="AAH01238.1"
/db_xref="GeneID:8886"
/db_xref="HGNC:HGNC:2741"
/db_xref="MIM:606355"
/translation="MSHLPMKLLRKKIEKRNLKLRQRNLKFQGASNLTLSETQNGDVS
EETMGSRKVKKSKQKPMNVGLSETQNGGMSQEAVGNIKVTKSPQKSTVLSNGEAAMQS
SNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEKPDNDEDE
SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRD
LLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMT
HHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDE
ADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDK
ANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDL
PVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKE
YIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLE
KLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLN
VNSNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISKKSSDSRQFSH"
BASE COUNT 770 a 450 c 511 g 652 t
ORIGIN
1 gccttatttt aggcacttgt tgggcagaat gtcacacctg ccgatgaaac tcctgcgtaa
61 gaagatcgag aagcggaacc tcaaattgcg gcagcggaac ctaaagtttc agggggcctc
121 aaatctgacc ctatcggaaa ctcaaaatgg agatgtatct gaagaaacaa tgggaagtag
181 aaaggttaaa aaatcaaaac aaaagcccat gaatgtgggc ttatcagaaa ctcaaaatgg
241 aggcatgtct caagaagcag tgggaaatat aaaagttaca aagtctcccc agaaatccac
301 tgtattaagc aatggagaag cagcaatgca gtcttccaat tcagaatcaa aaaagaaaaa
361 gaagaaaaag agaaaaatgg tgaatgatgc tgagcctgat acgaaaaaag caaaaactga
421 aaacaaaggg aaatctgaag aagaaagtgc cgagactact aaagaaacag aaaataatgt
481 ggagaagcca gataatgatg aagatgagag tgaggtgccc agtctgcccc tgggactgac
541 aggagctttt gaggatactt cgtttgcttc tctatgtaat cttgtcaatg aaaacactct
601 gaaggcaata aaagaaatgg gttttacaaa catgactgaa attcagcata aaagtatcag
661 accacttctg gaaggcaggg atcttctagc agctgcaaaa acaggcagtg gtaaaaccct
721 ggcttttctc atccctgcag ttgaactcat tgttaagtta aggttcatgc ccaggaatgg
781 aacaggagtc cttattctct cacctactag agaactagcc atgcaaacct ttggtgttct
841 taaggagctg atgactcacc acgtgcatac ctatggcttg ataatgggtg gcagtaacag
901 atctgctgaa gcacagaaac ttggtaatgg gatcaacatc attgtggcca caccaggccg
961 tctgctggac catatgcaga ataccccagg atttatgtat aaaaacctgc agtgtctggt
1021 tattgatgaa gctgatcgta tcttggatgt ggggtttgaa gaggaattaa agcaaattat
1081 taaacttttg ccaacacgta gacagactat gctcttttct gccacccaaa ctcgaaaagt
1141 tgaagacctg gcaaggattt ctctgaaaaa ggagccattg tatgttggcg ttgatgatga
1201 taaagcgaat gcaacagtgg atggtcttga acagggatat gttgtttgtc cttctgaaaa
1261 gagattcctt ctgctcttta cattccttaa gaagaaccga aagaagaagc ttatggtctt
1321 cttttcatct tgtatgtctg tgaaatacca ctatgagttg ctgaactaca ttgatttgcc
1381 cgtcttggcc attcatggaa agcaaaagca aaataagcgt acaaccacat tcttccagtt
1441 ctgcaatgca gattcgggaa cactattgtg tacggatgtg gcagcgagag gactagacat
1501 tcctgaagtc gactggattg ttcagtatga ccctccggat gaccctaagg aatatattca
1561 tcgtgtgggt agaacagcca gaggcctaaa tgggagaggg catgccttgc tcattttgcg
1621 cccagaagaa ttgggttttc ttcgctactt gaaacaatcc aaggttccat taagtgaatt
1681 tgacttttcc tggtctaaaa tttctgacat tcagtctcag cttgagaaat tgattgaaaa
1741 gaattacttt cttcataagt cagcccagga agcatataag tcatacatac gagcctatga
1801 ttcccattct ctgaaacaga tctttaatgt taataaccta aatttgcctc aggttgctct
1861 gtcatttggt ttcaaggtgc ctcccttcgt tgatctgaac gtcaacagta atgaaggcaa
1921 gcagaaaaag cgaggaggtg gtggtggatt tggctaccag aaaaccaaga aagttgagaa
1981 atccaaaatc tttaaacaca ttagcaagaa atcatctgac agcaggcagt tctctcactg
2041 aacacatgcc ttcctttcat cttgaataac tttgtcctaa aatgaatttt ttttcccctt
2101 gatttaacag gatttttgta gactttagaa tttggactta cctaacaaga gtataaattg
2161 acttgggttg caagcactga gcactgttac ttctatcacg tctctctttt atttctggga
2221 tataaaacag gctttaagtt tcttggttgc ccaagggcag agcaaggaat atctggtgtt
2281 tcttgtgatg ataatatttt aattttaaat atccctccct catacaagtg tatgttacca
2341 ttttaatata attctttttg tatctttaaa aaaaaaaaaa aaa
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