LOCUS BC001178 1129 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATP synthase, H+ transporting, mitochondrial F0
complex, subunit F6, mRNA (cDNA clone MGC:2243 IMAGE:3357779),
complete cds.
ACCESSION BC001178
VERSION BC001178.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1129)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1129)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51479133.
FEATURES Location/Qualifiers
source 1..1129
/db_xref="H-InvDB:HIT000030199"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2243 IMAGE:3357779"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1129
/gene="ATP5J"
/gene_synonym="CF6"
/gene_synonym="F6"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
CDS 693..1019
/gene="ATP5J"
/gene_synonym="CF6"
/gene_synonym="F6"
/codon_start=1
/product="ATP synthase, H+ transporting, mitochondrial F0
complex, subunit F6"
/protein_id="AAH01178.1"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
/translation="MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFV
DKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEV
IEKPQA"
BASE COUNT 298 a 318 c 289 g 224 t
ORIGIN
1 gcggccgcgg gggggccctt gtgggggaaa aggccccgga acgaggccgg cccgcgaggg
61 cccgcgctcc cctcctcccc ggcggccgca ctcacccact ccggaatcgg ccctgtcgcc
121 cccgcccgca ctccagagcc ggctgagaac ggcagcggcg agggctccac gtgcagcgtc
181 tctccgggta agacctgcag ctcccgcgac tagaagtgtg aggtcccagg gcccttcccg
241 cggaatcggc gctgagaagc cccaaccccc ctcccgcctc ccaggcacct tcgggtccag
301 gactacaact cccggcaggg tgcgcaaaac gaccgcccaa ggcaacggag gctcacgagg
361 tacaaggaag cacaacgccc caatccgctt tgttttacac agtctcactt tccctgcacc
421 tttatacact tcgataaccc taacgaacag gacgctgact cggaggggag cttgaactag
481 gggaaaggcc actcaaagag cgcatgcgta cagagcaagg tttcaaggag gggaaaaaga
541 acgggtcaaa ttaggcgaag aaaagatggc ggaggctgtg ccaggggacc cggaagcact
601 taccctccac ttcctcctcc tgtttggctt ctgtctcacc tagacccgtc cggtcgcaga
661 ctgtctccga gacgcttcct gtccgaatca gcatgattct tcagaggctc ttcaggttct
721 cctctgtcat tcggtcagcc gtctcagtcc atttgcggag gaacattggt gttacagcag
781 tggcatttaa taaggaactt gatcctatac agaaactctt tgtggacaag attagagaat
841 acaaatctaa gcgacagaca tctggaggac ctgttgatgc tagttcagag tatcagcaag
901 agctggagag ggagcttttt aagctcaagc aaatgtttgg taatgcagac atgaatacat
961 ttcccacctt caaatttgaa gatcccaaat ttgaagtcat cgaaaaaccc caggcctgaa
1021 gaaataaagt aaaattaatc tggtaatttg tcacggatta gttgtacaac tagttagaag
1081 tttcagaata aacatgcatt tcataactgt caaaaaaaaa aaaaaaaaa
//