LOCUS BC001175 2871 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens protein phosphatase 2, regulatory subunit B', delta
isoform, mRNA (cDNA clone MGC:2134 IMAGE:3355395), complete cds.
ACCESSION BC001175
VERSION BC001175.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2871)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2871)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: h Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31083287.
FEATURES Location/Qualifiers
source 1..2871
/db_xref="H-InvDB:HIT000030196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2134 IMAGE:3355395"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2871
/gene="PPP2R5D"
/gene_synonym="B56D"
/db_xref="GeneID:5528"
/db_xref="HGNC:HGNC:9312"
/db_xref="MIM:601646"
CDS 87..1799
/gene="PPP2R5D"
/gene_synonym="B56D"
/codon_start=1
/product="protein phosphatase 2, regulatory subunit B',
delta isoform"
/protein_id="AAH01175.1"
/db_xref="GeneID:5528"
/db_xref="HGNC:HGNC:9312"
/db_xref="MIM:601646"
/translation="MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQP
QPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKELFIQKLRQCCVLFDFVSD
PLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGA
EFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSE
DPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSII
NGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLL
KFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALY
YWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFD
DCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT
AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTAS
QEAL"
BASE COUNT 707 a 805 c 763 g 596 t
ORIGIN
1 gagacgccga gcgggccgag tgcggccgag caaagccgga gccggagcgg ggccgcagga
61 gacgggccgg gtccggacgg gccgagatgc cctataaact gaaaaaggag aaggagcccc
121 ccaaggttgc caaatgcaca gccaagccta gcagctcggg caaggatggt ggaggcgaga
181 acactgagga ggcccagccg cagccccagc cccagcccca gccccaagcc cagtctcagc
241 caccgtcatc caacaagcgt cccagcaata gcacgccgcc ccccacgcag ctcagcaaaa
301 tcaagtactc aggggggccc cagattgtca agaaggagct gtttatccag aagctacgcc
361 agtgctgtgt cctctttgac ttcgtgtcag acccactcag tgacctcaaa ttcaaggagg
421 tgaagcgggc aggactcaac gagatggtgg agtacatcac ccatagccgt gatgttgtca
481 ctgaggccat ttaccctgag gctgtcacca tgttttcagt gaacctcttc cggacgctgc
541 caccttcatc gaatcccaca ggggctgagt ttgacccaga ggaagatgag cccaccctgg
601 aagctgcttg gccacatctc cagctcgtgt atgagttctt cttacgtttc cttgagtctc
661 ctgatttcca gccaaacata gccaagaagt acatcgacca gaagtttgta cttgctctcc
721 tagacctatt tgacagtgag gatcctcgag agcgggactt cctcaagacc attttgcatc
781 gcatctatgg caagtttttg gggctccggg cttatatccg taggcagatc aaccacatct
841 tctacaggtt catctacgag acggagcatc acaacgggat tgctgagctc ctggagatcc
901 tgggcagcat catcaatggc tttgccctgc cccttaaaga agagcacaag atgttcctca
961 tccgtgtcct acttcccctt cacaaggtca agtccctgag tgtctaccac cctcagctgg
1021 catactgtgt ggtacaattc ctggagaagg agagcagtct gactgagccg gtaattgtgg
1081 gacttctcaa gttttggccc aagacccaca gccccaagga ggtgatgttc ttgaatgagc
1141 tggaggagat tctggacgtc attgaacctt ctgagttcag caaagtgatg gaacccctct
1201 tccgccagct ggccaagtgt gtctctagcc cccatttcca ggtggcagag cgtgctctct
1261 attactggaa caatgagtac atcatgagcc tgataagtga caatgctgcc cgagtcctcc
1321 ccatcatgtt ccctgcactc tacaggaact ccaagagcca ctggaacaag acaatccatg
1381 gactgatcta taatgccctg aagttgttta tggaaatgaa tcagaagctg tttgatgact
1441 gcacacaaca atacaaggca gagaagcaga agggccggtt ccgaatgaag gaaagggaag
1501 agatgtggca aaaaatcgag gagctggccc ggcttaatcc ccagtatccc atgttccgag
1561 cccctccacc actgccccct gtgtactcga tggagacaga gacccccaca gctgaggaca
1621 tccagcttct gaagaggact gtggagactg aggctgttca gatgctaaaa gacatcaaga
1681 aggagaaagt gctgctgcgg aggaagtcgg agctgcccca ggacgtgtac accatcaagg
1741 cactggaggc gcacaagcgg gcggaagagt tcctaactgc cagccaggag gctctctgac
1801 ccctcacgtt cctaccacag ggccacagcc cacacagccc tgggacactg ccctggccct
1861 ccatactctg ctccctactg gctgtcttgg gggaaggcag cgcctctcta gctactcaag
1921 ggagggggat gtgggcactt gaagcaggga cacccacaga atggtccctc ttctccccaa
1981 aaggtgttca tgcctccctg tggctagtac aggctgagca ctaagatgct tagtgctcag
2041 acaacctggg gatgcctgtc ccctacctgc tcctcaccca cagctacctg aggctgctct
2101 gagaagtaca cacaggaata catacgctcc tctattcttc ccttcatcct catttgaacg
2161 ccaggtatct cccctcctct ctctcccctg cagaggcatg tagggaacag caggagatta
2221 ttctcaccaa agttatgtca agccccattg gtcccagagt agctgaaggg aagccaaccc
2281 ccctgcagca caaataggcc ccccagtccc agccgtgtgc tggcagatag ggttgtatta
2341 tttcttctta ccccatgcct gaccaaggga ggtcaaaagg agaaaagtat aggctgtgga
2401 caataactga tgaatatagg gcccagatgg accaagtggg gccggggagg gatgaataaa
2461 caccctaccc cgtgccctgt ctttggtgag cagcagccct ggggtcacag acatggaagg
2521 gaccaccctg gggctgactg cttttctgtg ctgttggttc ccaaaactag aaagaaggaa
2581 gcagggagcg gtgccccaag catggctcct gccaacacct atttatttcc ttgtttgtgc
2641 tatgctgggc aggccttctc ttgtccctta taggtacctt ggaggggcca ggggctgagg
2701 aaggccggac ccaggttcca ggggcgcagg cagtgcggct tttggctgtg tacatagggt
2761 gctttattct ccacagagtg atacatgcta aggtgggttg ggcttggacc gatgtcccca
2821 tatgtacaga actgaataaa gtgggtctct gagaaaaaaa aaaaaaaaaa a
//