LOCUS BC001172 1066 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transcriptional adaptor 2 (ADA2 homolog, yeast)-like,
mRNA (cDNA clone MGC:1984 IMAGE:3355742), complete cds.
ACCESSION BC001172
VERSION BC001172.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1066)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1066)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68509269.
FEATURES Location/Qualifiers
source 1..1066
/db_xref="H-InvDB:HIT000030193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1984 IMAGE:3355742"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1066
/gene="TADA2L"
/gene_synonym="ADA2"
/gene_synonym="FLJ12705"
/gene_synonym="hADA2"
/gene_synonym="KL04P"
/db_xref="GeneID:6871"
/db_xref="HGNC:HGNC:11531"
/db_xref="MIM:602276"
CDS 109..1026
/gene="TADA2L"
/gene_synonym="ADA2"
/gene_synonym="FLJ12705"
/gene_synonym="hADA2"
/gene_synonym="KL04P"
/codon_start=1
/product="transcriptional adaptor 2 (ADA2 homolog,
yeast)-like"
/protein_id="AAH01172.1"
/db_xref="GeneID:6871"
/db_xref="HGNC:HGNC:11531"
/db_xref="MIM:602276"
/translation="MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQ
CFTRGFEYKKHQSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQM
CTKTKEECEKHYMKYFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSL
LSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKER
QRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHACR
WFLSLEQYLCVYIYINRRDNGVFYVKFYK"
BASE COUNT 320 a 205 c 249 g 292 t
ORIGIN
1 gtctcggcga gggagtcatc aagctttggt gtatgtgttg gccggttctg aagtcttgaa
61 gaagctctgc tgaggaagac caaagcagca ctcgttgcca attagggaat ggaccgtttg
121 ggttccttta gcaatgatcc ctctgataag ccaccttgcc gaggctgctc ctcctacctc
181 atggagcctt atatcaagtg tgctgaatgt gggccacctc cttttttcct ctgcttgcag
241 tgtttcactc gaggctttga gtacaagaaa catcaaagcg atcatactta tgaaataatg
301 acttcagatt ttcctgtcct tgatcccagc tggactgctc aagaagaaat ggccctttta
361 gaagctgtga tggactgtgg ctttggaaat tggcaggatg tagccaatca aatgtgcacc
421 aagaccaagg aggagtgtga gaagcactat atgaagtatt tcatcaataa ccctctgttt
481 gcatctaccc tgctgaacct gaaacaagca gaggaagcaa aaactgctga cacagccatt
541 ccatttcact ctacagatga ccctccccga cctacctttg actccttgct ttctcgggac
601 atggccgggt acatgccagc tcgagcagat ttcattgagg aatttgacaa ttatgcagaa
661 tgggacttga gagacattga ttttgttgaa gatgactcgg acattttaca tgctctgaag
721 atggctgtgg tagatatcta tcattccagg ttaaaggaga gacaaagacg aaaaaaaatt
781 ataagagacc atggattaat caaccttaga aagtttcaat taatggaacg gcggtatccc
841 aaggaggtcc aggacctgta tgaaacaatg aggcgatttg caagaattgt ggggccagtg
901 gaacatgaca aattcattga aagccatgca tgtaggtggt ttttgagcct tgagcagtat
961 ttgtgtgtgt atatttatat aaataggaga gataatggtg tgttttatgt gaagttctat
1021 aaataaataa atggatattt ctcaaaaaaa aaaaaaaaaa aaaaaa
//