LOCUS BC001164 1307 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8, mRNA (cDNA clone MGC:1660 IMAGE:3528096), complete
cds.
ACCESSION BC001164
VERSION BC001164.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812361.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000030187"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1660 IMAGE:3528096"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1307
/gene="PSMD8"
/gene_synonym="HIP6"
/gene_synonym="HYPF"
/gene_synonym="MGC1660"
/gene_synonym="Nin1p"
/gene_synonym="p31"
/gene_synonym="S14"
/db_xref="GeneID:5714"
/db_xref="HGNC:HGNC:9566"
CDS 83..856
/gene="PSMD8"
/gene_synonym="HIP6"
/gene_synonym="HYPF"
/gene_synonym="MGC1660"
/gene_synonym="Nin1p"
/gene_synonym="p31"
/gene_synonym="S14"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8"
/protein_id="AAH01164.3"
/db_xref="GeneID:5714"
/db_xref="HGNC:HGNC:9566"
/translation="MYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGTKLT
KQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLN
LLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPA
ESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLG
PNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV"
BASE COUNT 335 a 363 c 353 g 256 t
ORIGIN
1 cgcggcggtg aacggggcgg caggcttctc gagctccggg cccgcggcaa cctcgggcgc
61 tgttctgcag gccgcgaccg gcatgtacga gcaactcaag ggcgagtgga accgtaaaag
121 ccccaatctt agcaagtgcg gggaagagct gggtcgactc aagctagttc ttctggagct
181 caacttcttg ccaaccacag ggaccaagct gaccaaacag cagctaattc tggcccgtga
241 catactggag atcggggccc aatggagcat cctacgcaag gacatcccct ccttcgagcg
301 ctacatggcc cagctcaaat gctactactt tgattacaag gagcagctcc ccgagtcagc
361 ctatatgcac cagctcttgg gcctcaacct cctcttcctg ctgtcccaga accgggtggc
421 tgagttccac acggagttgg agcggctgcc tgccaaggac atacagacca atgtctacat
481 caagcaccca gtgtccctgg agcaatacct gatggagggc agctacaaca aagtgttcct
541 ggccaagggt aacatccccg ccgagagcta caccttcttc attgacatcc tgctcgacac
601 tatcagggat gagatcgctg ggtgcatcga gaaggcctac gagaaaatcc ttttcactga
661 ggccacccgg atcctcttct tcaacacacc caaaaagatg acagactacg ccaagaagcg
721 agggtgggtc ctgggcccca acaactacta cagttttgcc agccagcagc agaagccgga
781 agacaccacc attccctcca cagaactggc caaacaggtc atcgagtatg cccggcagct
841 ggagatgatc gtctgagccc cccgggcact gggtggggca gggcacgagt tatttaaaac
901 agttacactg cagggtttcg cccaataaag gtggactgac attccctctt ccaggccctt
961 gtctccccag ttgggacggc agagagacaa gttcttatat ctgaagaact tggaggtttt
1021 ggggcattca ggagttggag atagcctcca actgggtcag cctctgtctg gtgggcattg
1081 ctcagggtct caaacatgga cgcccactgt ggggccccag cagcactgtg gcctgcagga
1141 gggcatggcc ccaggtaggg ggactgttct agccagctgt ggacacatag gaatgctgga
1201 ccagggtacc agattttttc aacaaagggg gtgaagtgtc ctactaaaaa gaataaatgt
1261 tggcagtgaa ttaaacaatt tttcaaatga aaaaaaaaaa aaaaaaa
//