LOCUS BC001162 2980 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens signal recognition particle receptor (docking
protein), mRNA (cDNA clone MGC:1609 IMAGE:3528505), complete cds.
ACCESSION BC001162
VERSION BC001162.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23308696.
FEATURES Location/Qualifiers
source 1..2980
/db_xref="H-InvDB:HIT000030185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1609 IMAGE:3528505"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2980
/gene="SRPR"
/gene_synonym="DP"
/gene_synonym="Sralpha"
/gene_synonym="SRP-alpha"
/db_xref="GeneID:6734"
/db_xref="HGNC:HGNC:11307"
/db_xref="MIM:182180"
CDS 59..1975
/gene="SRPR"
/gene_synonym="DP"
/gene_synonym="Sralpha"
/gene_synonym="SRP-alpha"
/codon_start=1
/product="signal recognition particle receptor (docking
protein)"
/protein_id="AAH01162.1"
/db_xref="GeneID:6734"
/db_xref="HGNC:HGNC:11307"
/db_xref="MIM:182180"
/translation="MLDFFTIFSKGGLVLWCFQGVSDSCTGPVNALIRSVLLQERGGN
NSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQS
ALSLLNGTFDFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKP
KEKAKNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVGPENGVELSKEELIRRKREEFI
QKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSE
DINLIRGTGSGGQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLS
REDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQES
LVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL
IAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF
ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKF
NRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLR
SLNAKAVVAALMKA"
BASE COUNT 760 a 763 c 751 g 706 t
ORIGIN
1 ggcggcgaac gcggcctgaa ttcccggcgc cggccccagc tcctctgccg ctgccgccat
61 gctcgacttc ttcaccattt tctccaaggg cgggcttgtg ctctggtgct tccagggcgt
121 tagcgactca tgcaccggac ccgttaacgc gttgattcgt tccgtgctgc tgcaggaacg
181 gggaggtaac aactccttca cccatgaggc actcacactc aagtataaac tggacaacca
241 gtttgagctg gtgtttgtgg ttggttttca gaagatcctg acactgacat atgtagacaa
301 attgatagat gacgtgcatc ggctgtttcg ggacaagtac cgcacagaga tccaacagca
361 aagtgcttta agtttattaa atggcacttt tgatttccaa aatgacttcc tgcggctcct
421 tcgtgaagca gaggagagca gtaagatccg tgctcccact accatgaaga aatttgaaga
481 ttctgaaaag gccaagaaac ctgtgaggtc catgattgag acacgggggg aaaagcccaa
541 ggaaaaagca aagaatagca aaaaaaaggg ggccaagaag gaaggttctg atggtccttt
601 ggctaccagc aaaccagtcc ctgcagaaaa gtcaggtctt ccagtgggtc ctgagaacgg
661 agtagaactt tccaaagagg agctgatccg caggaagcgc gaggagttca ttcagaagca
721 tgggaggggt atggagaagt ccaacaagtc cacgaagtca gatgctccaa aggagaaggg
781 caaaaaagca ccccgggtgt gggaactggg tggctgtgct aacaaagaag tgttggatta
841 cagtactccc accaccaatg gaacccctga ggctgccttg tctgaggaca tcaacctgat
901 tcgagggact gggtctgggg ggcagcttca ggatctggac tgcagcagct ctgatgacga
961 aggggctgct caaaactcta ccaaacctag tgcgaccaag ggaacactgg gtggcatgtt
1021 tggtatgctg aagggccttg tgggttcaaa gagcttgagt cgtgaagaca tggaatctgt
1081 gctggacaag atgcgtgatc atctcattgc taagaacgtg gctgcagaca ttgccgtcca
1141 gctctgtgaa tctgttgcca acaagttgga agggaaggtg atggggacgt tcagcacggt
1201 gacttccaca gtaaagcaag ccctacagga gtccctggtg cagattctgc agccacagcg
1261 tcgtgtagac atgctccggg acatcatgga tgcccagcgt cgccagcgcc cttatgtcgt
1321 caccttctgc ggcgttaatg gagtggggaa atctactaat cttgccaaga tttccttctg
1381 gttgttagag aatggcttca gtgtcctcat tgctgcctgt gatacatttc gtgctggggc
1441 cgtggagcag ctgcgtacac acacccggcg tttgagtgcc ctacaccctc cagagaagca
1501 tggtggccgc accatggtgc agttgtttga aaagggctat ggcaaggatg ctgctggcat
1561 tgccatggaa gccattgctt ttgcacgtaa ccaaggcttt gacgtggtgc tggtggacac
1621 ggcaggccgc atgcaagaca atgcccctct gatgactgcc ctggccaaac tcattactgt
1681 caatacacct gatttggtgc tgtttgtagg agaagcctta gtaggcaatg aagccgtgga
1741 ccagctggtc aagttcaaca gagccttggc tgaccattct atggctcaga cacctcggct
1801 cattgatggc attgttctta ccaaatttga taccattgat gacaaggtgg gagctgctat
1861 ttctatgacg tacatcacaa gcaaacccat cgtctttgtg ggcaccggcc agacctactg
1921 tgacctacgc agcctcaatg ccaaggctgt ggtggctgcc ctcatgaagg cttaacgtgg
1981 ctcttgccca ataccaaatc gccgctttcc ccacaagccc ttcttcctgt atcaagaatg
2041 tgctttagag tatgtgagca acctgtcttc agtgtagtac aaaggcagag tgagggggct
2101 tgtggctcct tccaacccca ctccccgttc agcacagccg ccatttgcaa ggaaggccta
2161 atcatgttac aatcactgcc cactgaccct ctcccagcgg gcctccccct tcctactcag
2221 gcaccccctt cactctgcct acagactcag tcttattaca gctttgacca atggttggaa
2281 cccaacacca gagctttgct aataattagt gtggtcaaga gccgtctgag cctaatgagt
2341 cccagctgca ttaggttaag agactcttcc agagccagcg ccaggtcttg aatggcacct
2401 ctccctagga tacacagcct gcaggtcccc aggacctgga tgacacccgc ctcactgtgg
2461 cagtgtattg cctgttaatt gctgctaatt ctaattctga tgatgactcc tactccattg
2521 tttaccccaa agcatcagct aggctggagt gatttgttac aaatgagcaa aagatgagtc
2581 cttgcttccc tcagaaataa aagtagctca gctgcagcgt tgcattgggc ttcttggcct
2641 cccaactctt cccactccca gaatccagaa gtaagctctg catgttcccc ttcctgggag
2701 gaaaccaatt gtcagaagga tgtatgatga ccccctcccc tcccatcctt cacctcctaa
2761 gcagtcctgg cttttcctca tcactcccct ctacagtgcc tggtagacaa gtgctacatt
2821 gaagaacaca aacctcttgt taagacttgt cctgtagctt gatattacag atgtgctatt
2881 agtgcaataa ggtgaaggct gtctgcccag agaaataagt aatttatata agaaaataaa
2941 tttcataaat aaattgcaaa aaaaaaaaaa aaaaaaaaaa
//