LOCUS BC001147 1488 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens peroxisomal membrane protein 4, 24kDa, mRNA (cDNA
clone MGC:1213 IMAGE:3533572), complete cds.
ACCESSION BC001147
VERSION BC001147.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1488)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1488)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005833.
FEATURES Location/Qualifiers
source 1..1488
/db_xref="H-InvDB:HIT000030173"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1213 IMAGE:3533572"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1488
/gene="PXMP4"
/gene_synonym="PMP24"
/db_xref="GeneID:11264"
CDS 25..663
/gene="PXMP4"
/gene_synonym="PMP24"
/codon_start=1
/product="PXMP4 protein"
/protein_id="AAH01147.1"
/db_xref="GeneID:11264"
/translation="MAAPPQLRALLVVVNALLRKRRYHAALAVLKGFRNGAVYGAKIR
APHALVMTFLFRNGSLQEKLWAILQATYIHSWNLARFVFTYKGLRALQSYIQGKTYPA
HAFLAAFLGGILVFGENNNINSQINMYLLSRVLFALSRLAVEKGYIPEPRWDPFPLLT
AVVWGLVLWLFEYHRSTLQPSLQSSMTYLYEDSNVWHDISDFLIYNKSRPSN"
BASE COUNT 352 a 406 c 380 g 350 t
ORIGIN
1 ccgaccctgc gcgcagcccg cactatggca gccccgccgc agctaagggc tctgctcgta
61 gtcgtcaacg cactgctgcg caagcgccgc taccacgctg cgttggccgt gcttaagggc
121 ttccggaacg gggctgtcta tggagccaaa atccgggccc ctcacgcgct ggtcatgacc
181 tttctcttcc ggaatggcag cctccaggag aagctgtggg ccatactgca ggccacatat
241 atccactcct ggaacctggc acggtttgtg ttcacctaca agggtctccg tgccctgcag
301 tcctacatac aaggcaagac ctacccagca cacgcattcc tggcggcctt cctcgggggt
361 atcctggtgt ttggagaaaa caataacatc aacagccaga tcaacatgta cctgttgtca
421 cgcgtcctgt ttgccctgag ccgcctggct gtagagaagg gctacatccc tgaacccagg
481 tgggacccgt tcccgctgct cactgcggtg gtgtgggggc tggtgctgtg gctctttgag
541 tatcaccgat ccaccctgca gccctcgctg cagtcctcca tgacctacct ctatgaggac
601 agcaatgtat ggcacgacat ctcagacttc ctcatctata acaagagccg tccctccaat
661 taatgcagcc ctgaggtgtc tggctgtggc tcaagatttg gccccatgca gaccctccca
721 aaggatactg ccttctcaag atcataggcc tcagactcca actggtgtta tcccagggtt
781 ccgtttgctg aagtaaaaac actgatttta aaatcccagt gggtaccttt gtatggtggc
841 acaagtggcc gaatcaggct gaggaatcta cggcttggtt ccagctgtgc agctgacttc
901 tgtgagactg gggccagcca cactactctc taggcctcag gggtcaagga gctcagagga
961 gggccctgag gtctctttcc ggtgggtatg ttcattcttc aactgttctt atgtcacaga
1021 gggctccttg ctggtgggca gtgggttgta aatacttttt aaaaaacact aagttcctta
1081 tctcagatgc tgttctactg gagaagttct agattcccac tgtccaatag aaacacgtga
1141 gccatatatg taattaaaat gtttctagta gctgcattac aaaaaagaag cctgggcact
1201 gtggctcacg cctgtaatcc cagcactttg ggaggctgag gcaggcagat aacctgagat
1261 caggagttct tgaccagcct ggccaacatg gtaaaacccc atctctacta aaaatacaaa
1321 aattagctgg acatggtggc aggcacctgt aattccagct acttgggagg ctgaggtggg
1381 agaatctctt gaacctgggg ggctgctgtg agccgagata gttccattac acttcagcct
1441 gggtgacaga gtaagactct gtctcaaaaa aaaaaaaaaa aaaaaaaa
//