LOCUS BC001146 1610 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens flotillin 1, mRNA (cDNA clone MGC:1199 IMAGE:3534771),
complete cds.
ACCESSION BC001146
VERSION BC001146.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1610)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6552331.
FEATURES Location/Qualifiers
source 1..1610
/db_xref="H-InvDB:HIT000030172_08"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1199 IMAGE:3534771"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1610
/gene="FLOT1"
/db_xref="GeneID:10211"
/db_xref="HGNC:HGNC:3757"
/db_xref="MIM:606998"
CDS 23..1306
/gene="FLOT1"
/codon_start=1
/product="flotillin 1"
/protein_id="AAH01146.1"
/db_xref="GeneID:10211"
/db_xref="HGNC:HGNC:3757"
/db_xref="MIM:606998"
/translation="MFFTCGPNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLN
TLTLNVKSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKTEAEIAHIALE
TLEGHQRAIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDY
LHSLGKARTAQVQKDARIGEAEAKRDAGIREAKAKQEKVSAQYLSEIEMAKAQRDYEL
KKAAYDIEVNTRRAQADLAYQLQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARRE
KELEARVRKPAEAERYKLERLAEAEKSQLIMQAEAEAASVRMRGEAEAFAIGARARAE
AEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEISGPLTSANKITLVSSGSGTMGAAK
VTGEVLDILTRLPESVERLTGVSISQVNHKPLRTA"
BASE COUNT 409 a 427 c 469 g 305 t
ORIGIN
1 cccggaagct ccagcctgaa ccatgttttt cacttgtggc ccaaatgagg ccatggtggt
61 ctccgggttc tgccgaagcc ccccagtcat ggtggctgga gggcgtgtct ttgtcctgcc
121 ctgcatccaa cagatccaga ggatctctct caacacactg accctcaatg tcaagagtga
181 aaaggtttac actcgccatg gggtccccat ctcagtcact ggcattgccc aggtaaaaat
241 ccaggggcag aacaaggaga tgttggcggc cgcctgtcag atgttcctgg ggaagacgga
301 ggctgagatt gcccacattg ccctggagac gttagagggc caccagaggg ccatcatggc
361 ccacatgact gtggaggaga tctataagga caggcagaaa ttctcagaac aggttttcaa
421 agtggcctcc tcagacctgg tcaacatggg catcagtgtg gttagctaca ctctgaagga
481 cattcacgat gaccaggact atttgcactc tttggggaag gctcgaacag ctcaagtcca
541 aaaagatgca cggattggag aagcagaggc caagagagat gctgggatcc gggaagctaa
601 agccaagcag gaaaaggtgt ctgctcagta cctgagtgag atcgagatgg ccaaggcaca
661 gagagattac gaactgaaga aggccgccta tgacatcgag gtcaacaccc gccgagcaca
721 ggctgacctg gcctatcagc ttcaggtggc caagactaag cagcagattg aggagcagcg
781 ggtgcaggtg caggtggtgg agcgggccca gcaggtggca gtgcaggagc aggagatcgc
841 ccggcgggag aaggagctgg aggcccgggt gcggaagcca gcggaagcgg agcgctacaa
901 gctggagcgc ctagccgagg cagagaagtc ccaactaatt atgcaggcgg aggcagaagc
961 cgcgtctgtg cggatgcgtg gggaagctga ggcctttgcc ataggggccc gagcccgagc
1021 cgaggctgag cagatggcca agaaggcaga agccttccag ctgtaccaag aggctgctca
1081 gctggacatg ctgctagaga agctgcccca ggtggcagag gagatcagtg gtcccttgac
1141 ttcagccaat aagatcacac tggtgtccag cggcagtggg accatggggg cagccaaagt
1201 gactggggaa gtactggaca ttctaactcg cctgccagag agtgtggaaa gactcacagg
1261 cgtgagcatc tcccaggtga atcacaagcc tttgagaaca gcctgagcct tcagccctca
1321 cagatgccca gcctcatagc tgaagttgcc tgaatgatcc tcctgttgca tgtaacccac
1381 tggcctccct gagcatgtcc attgacagtg aggtcccacc cctcatctct ccttgccaaa
1441 tagtttgtgc cttgtcttga agggggttgc tccccttgcc aacctcacac tgctatgatt
1501 gccaactcca gcggtcccat gtcagccttc tgatgatccc actccacccc acctcaactt
1561 atttaacttc ctaattaaat cagactgttt gaaaaaaaaa aaaaaaaaaa
//