LOCUS BC001107 874 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FUS interacting protein (serine/arginine-rich) 1, mRNA
(cDNA clone MGC:968 IMAGE:3504780), complete cds.
ACCESSION BC001107
VERSION BC001107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: k Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16905515.
FEATURES Location/Qualifiers
source 1..874
/db_xref="H-InvDB:HIT000030139_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:968 IMAGE:3504780"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..874
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/db_xref="GeneID:10772"
/db_xref="HGNC:HGNC:16713"
/db_xref="MIM:605221"
CDS 102..653
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/codon_start=1
/product="FUS interacting protein (serine/arginine-rich)
1"
/protein_id="AAH01107.1"
/db_xref="GeneID:10772"
/db_xref="HGNC:HGNC:16713"
/db_xref="MIM:605221"
/translation="MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD
FYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR
NVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHS
DNDRPNCSWNTQYSSAYYTSRKI"
BASE COUNT 273 a 175 c 222 g 204 t
ORIGIN
1 gtagcagagc cctctagctg tgtgtgtctg aggctcggcc gcctgagccg cggacggttt
61 gctgagcccg ttagtgcgcc cggccgagac acgccgccgc catgtcccgc tacctgcgtc
121 cccccaacac gtctctgttc gtcaggaacg tggccgacga caccaggtct gaagacttgc
181 ggcgtgaatt tggtcgttat ggtcctatag ttgatgtgta tgttccactt gatttctaca
241 ctcgccgtcc aagaggattt gcttatgttc aatttgagga tgttcgtgat gctgaagacg
301 ctttacataa tttggacaga aagtggattt gtggacggca gattgaaata cagtttgccc
361 agggggatcg aaagacacca aatcagatga aagccaagga agggaggaat gtgtacagtt
421 cttcacgcta tgatgattat gacagataca gacgttctag aagccgaagt tatgaaagga
481 ggagatcaag aagtcggtct tttgattaca actatagaag atcgtatagt cctagaaaca
541 gtagaccgac tggaagacca cggcgtagca gaagccattc cgacaatgat agaccaaact
601 gcagctggaa tacccagtac agttctgctt actacacttc aagaaagatc tgaaagcgga
661 aaaagaacca aagaagggca gttcaagcga ccaaagggtg ggtggaaggt gctgcagtat
721 gaatactgta cgaatatttt gactctggtc tgaaaagata aaagaatgtt atcgaaaact
781 acatggaata attgaagtcc cttcaagttt gaaagtaagc attttaggac aaataaaagg
841 aaattcaact ttgtaaaaaa aaaaaaaaaa aaaa
//