LOCUS BC001093 1748 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PDZ and LIM domain 7 (enigma), mRNA (cDNA clone
MGC:3269 IMAGE:3506748), complete cds.
ACCESSION BC001093
VERSION BC001093.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1748)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001093.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42741673.
FEATURES Location/Qualifiers
source 1..1748
/db_xref="H-InvDB:HIT000030130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3269 IMAGE:3506748"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1748
/gene="PDLIM7"
/db_xref="GeneID:9260"
/db_xref="HGNC:HGNC:22958"
/db_xref="MIM:605903"
CDS 68..1441
/gene="PDLIM7"
/codon_start=1
/product="PDZ and LIM domain 7 (enigma)"
/protein_id="AAH01093.1"
/db_xref="GeneID:9260"
/db_xref="HGNC:HGNC:22958"
/db_xref="MIM:605903"
/translation="MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGV
AVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKASAPAADPP
RYTFAPSVSLNKTARPFGAPPPADSAPQQNGQPLRPLVPDASKQRLMENTEDWRPRPG
TGQSRSFRILAHLTGTEFMQDPDEEHLKKSSQVPRTEAPAPASSTPQEPWPGPTAPSP
TSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQSRTSIVQAAAGGVPGGGSNN
GKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYD
VRYAPSCAKCKKKITGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGVPYCERDY
EKMFGTKCHGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDRPLCK
SHAFSHV"
BASE COUNT 384 a 586 c 505 g 273 t
ORIGIN
1 cccaacgagg ctccctggag cccgacgcag agcagcgccc tggcctggcc aagcaggagc
61 cggcatcatg gattccttca aagtagtgct ggaggggcca gcaccttggg gcttccggct
121 gcaagggggc aaggacttca atgtgcccct ctccatttcc cggctcactc ctgggggcaa
181 agcggcgcag gccggagtgg ccgtgggtga ctgggtgctg agcatcgatg gcgagaatgc
241 gggtagcctc acacacatcg aagctcagaa caagatccgg gcctgcgggg agcgcctcag
301 cctgggcctc agcagggccc agccggttca gagcaaaccg cagaaggcct ccgcccccgc
361 cgcggaccct ccgcggtaca cctttgcacc cagcgtctcc ctcaacaaga cggcccggcc
421 ctttggggcg cccccgcccg ctgacagcgc cccgcagcag aatggacagc cgctccgacc
481 gctggtccca gatgccagca agcagcggct gatggagaac acagaggact ggcggccgcg
541 gccggggaca ggccagtcgc gttccttccg catccttgcc cacctcacag gcaccgagtt
601 catgcaagac ccggatgagg agcacctgaa gaaatcaagc caggtgccca ggacagaagc
661 cccagcccca gcctcatcta caccccagga gccctggcct ggccctaccg cccccagccc
721 taccagccgc ccgccctggg ctgtggaccc tgcgtttgcc gagcgctatg ccccggacaa
781 aacgagcaca gtgctgaccc ggcacagcca gccggccacg cccacgccgc tgcagagccg
841 cacctccatt gtgcaggcag ctgccggagg ggtgccagga gggggcagca acaacggcaa
901 gactcccgtg tgtcaccagt gccacaaggt catccggggc cgctacctgg tggcgctggg
961 ccacgcgtac cacccggagg agtttgtgtg tagccagtgt gggaaggtcc tggaagaggg
1021 tggcttcttt gaggagaagg gcgccatctt ctgcccacca tgctatgacg tgcgctatgc
1081 acccagctgt gccaagtgca agaagaagat tacaggcgag atcatgcacg ccctgaagat
1141 gacctggcac gtgcactgct ttacctgtgc tgcctgcaag acgcccatcc ggaacagggc
1201 cttctacatg gaggagggcg tgccctattg cgagcgagac tatgagaaga tgtttggcac
1261 gaaatgccat ggctgtgact tcaagatcga cgctggggac cgcttcctgg aggccctggg
1321 cttcagctgg catgacacct gcttcgtctg tgcgatatgt cagatcaacc tggaaggaaa
1381 gaccttctac tccaagaagg acaggcctct ctgcaagagc catgccttct ctcatgtgtg
1441 agccccttct gcccacagct gccgcggtgg cccctagcct gaggggcctg gagtcgtggc
1501 cctgcatttc tgggtagggc tggcaatggt tgccttaacc ctggctcctg gcccgagcct
1561 ggggctccct gggccctgcc ccacccacct tatcctccca ccccactccc tccaccacca
1621 cagcacaccg gtgctggcca caccagcccc ctttcacctc cagtgccaca ataaacctgt
1681 acccagctgt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaa
//