LOCUS BC001082 858 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens deleted in a mouse model of primary ciliary
dyskinesia, mRNA (cDNA clone MGC:2759 IMAGE:2907119), complete cds.
ACCESSION BC001082
VERSION BC001082.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001082.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: e Column: 2.
FEATURES Location/Qualifiers
source 1..858
/db_xref="H-InvDB:HIT000050392"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2759 IMAGE:2907119"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..858
/gene="RP11-529I10.4"
/gene_synonym="DKFZP566F084"
/db_xref="GeneID:25911"
CDS 6..617
/gene="RP11-529I10.4"
/gene_synonym="DKFZP566F084"
/codon_start=1
/product="deleted in a mouse model of primary ciliary
dyskinesia"
/protein_id="AAH01082.2"
/db_xref="GeneID:25911"
/translation="MAVTGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKT
SELLVRKWRVKSALGAMGQWQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSF
QWRIRNLPYPKDVYSVSVDQKERCIIVRTTNKKYYKKFSIPDLDRHQLPLDDALLSFA
HANCTLIISYQKPKEVVVAESELQKELKKVKTAHSNDGDCKTQ"
BASE COUNT 274 a 197 c 225 g 162 t
ORIGIN
1 gaaagatggc ggtgacgggc tggttggaga gtctgcggac agcccagaag actgcgctgc
61 tgcaggacgg gagaaggaag gttcactatt tattcccaga cggcaaggaa atggctgaag
121 aatatgacga gaagacgagt gaactacttg tgagaaagtg gcgtgtgaaa agtgccctgg
181 gagccatggg ccagtggcag cttgaagtag gagacccagc gcccctagga gcagggaacc
241 tggggcctga actcatcaag gaaagcaatg ccaatcctat cttcatgcgc aaggacacca
301 agatgagttt ccagtggcgg attcgaaacc tcccctatcc taaggatgtc tatagtgtct
361 ctgtggacca gaaggagcgc tgcatcattg tcagaacaac caacaagaag tactacaaga
421 agttctccat tcctgatcta gatagacacc agctacctct ggatgacgcc ttgctgagct
481 ttgcccacgc caactgcacc ctgatcatct cttaccagaa gccaaaggag gttgtggtgg
541 ccgagtctga gctacagaag gaactaaaga aggtgaagac agcccacagc aacgatgggg
601 actgcaagac ccagtagttg gcccctgagc cttatacctc caccacaggg ggtgccgtga
661 gacttcaagg cttggccctt cttgaccacg gcagcctcct gtcttctagg agctatcaag
721 ggtctctaag aactgggcat ggggcactcc tagccagtga gtcatggtca tatttcctga
781 gtaaagtcat tctgagttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaaaaaaaa aaaaaaaa
//