LOCUS BC001069 1460 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens Fas associated factor family member 2, mRNA (cDNA
clone MGC:2542 IMAGE:2961467), complete cds.
ACCESSION BC001069
VERSION BC001069.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797105.
FEATURES Location/Qualifiers
source 1..1460
/db_xref="H-InvDB:HIT000085951"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2542 IMAGE:2961467"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1460
/gene="FAF2"
/gene_synonym="ETEA"
/gene_synonym="UBXN3B"
/db_xref="GeneID:23197"
/db_xref="HGNC:HGNC:24666"
CDS 32..1369
/gene="FAF2"
/gene_synonym="ETEA"
/gene_synonym="UBXN3B"
/codon_start=1
/product="Fas associated factor family member 2"
/protein_id="AAH01069.2"
/db_xref="GeneID:23197"
/db_xref="HGNC:HGNC:24666"
/translation="MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIE
AAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLP
FRFTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYS
QALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEG
YRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSE
RLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEER
RRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLF
SLKESPEKFQIEANFPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE"
BASE COUNT 425 a 348 c 359 g 328 t
ORIGIN
1 gacgggtcag gagcgtagag gcggcggcaa aatggcggcg cctgaggagc gggatctaac
61 ccaggagcag acagagaagc tgctgcagtt tcaggatctc actggcatcg aatctatgga
121 tcagtgtcgc cataccttgg aacagcataa ctggaacata gaggctgctg tacaggacag
181 attgaatgag caagagggcg tacctagtgt tttcaaccca cctccatcac gacccctgca
241 ggttaataca gctgaccaca ggatctacag ctatgttgtc tcaagacctc aaccaagggg
301 gctgcttgga tggggttatt acttgataat gcttccattc cggtttacct attacacgat
361 acttgatata tttaggtttg ctcttcgttt tatacggcct gaccctcgca gccgggtcac
421 tgaccccgtt ggggacattg tttcatttat gcactctttt gaagagaaat atgggagggc
481 acaccctgtc ttctaccagg gaacgtacag ccaggcactt aacgatgcca aaagggagct
541 tcgctttctt ttggtttatc ttcatggaga tgatcaccag gactctgatg agttttgtcg
601 caacacactc tgtgcacctg aagttatttc actaataaac actaggatgc tcttctgggc
661 atgctctaca aacaaacctg agggatacag ggtctcacag gctttacgag agaacaccta
721 tccattcctg gccatgatta tgctgaagga tcgaaggatg actgtggtgg gacggctaga
781 aggcctcatt caacctgatg acctcattaa ccaactgaca tttatcatgg atgctaacca
841 gacttacctg gtgtcagaac gcctagaaag ggaagaaaga aaccagaccc aagtgctgag
901 acaacagcag gatgaggcct acctggcctc tctcagagct gaccaggaga aagaaagaaa
961 gaaacgggag gagcgggagc gtaagcggcg gaaggaggag gaggtgcaac agcaaaagtt
1021 ggcagaggag agacggcggc agaatttaca ggaggaaaag gaaaggaagt tggaatgcct
1081 gccccctgaa ccttcccctg atgaccctga aagtgtcaag atcatcttca aattacctaa
1141 tgattctcga gtagagagac gattccactt ttcacagtct ctaacagtaa tccacgactt
1201 cttattctcc ttgaaggaaa gcccagaaaa gtttcagatt gaagccaatt ttcccaggcg
1261 agtgctgccc tgcatccctt cagaggagtg gcccaatccc cctacgctac aggaggccgg
1321 actcagccac acagaagttc tttttgttca ggacctaact gacgaatgac atttttttct
1381 tcctgtcccc tcctacccca gtccctaaaa gaaatgggga aaaaagaaaa caacagcaag
1441 tcaaaaaaaa aaaaaaaaaa
//