LOCUS BC001056 2429 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein kinase, AMP-activated, beta 1 non-catalytic
subunit, mRNA (cDNA clone MGC:1878 IMAGE:2961281), complete cds.
ACCESSION BC001056
VERSION BC001056.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2429)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2429)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001056.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016923.
FEATURES Location/Qualifiers
source 1..2429
/db_xref="H-InvDB:HIT000030106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1878 IMAGE:2961281"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2429
/gene="PRKAB1"
/gene_synonym="AMPK"
/gene_synonym="HAMPKb"
/gene_synonym="MGC17785"
/db_xref="GeneID:5564"
/db_xref="HGNC:HGNC:9378"
/db_xref="MIM:602740"
CDS 267..1079
/gene="PRKAB1"
/gene_synonym="AMPK"
/gene_synonym="HAMPKb"
/gene_synonym="MGC17785"
/codon_start=1
/product="protein kinase, AMP-activated, beta 1
non-catalytic subunit"
/protein_id="AAH01056.1"
/db_xref="GeneID:5564"
/db_xref="HGNC:HGNC:9378"
/db_xref="MIM:602740"
/translation="MGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDA
DLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSK
LPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDF
EVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKD
TGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI"
BASE COUNT 601 a 645 c 607 g 576 t
ORIGIN
1 aagcggttgg gaaagtgtcg gtttatcttc gcgccccttg cgttcttgcc gcggcttgcc
61 tgggcaggta aagcgcgatt gcgagagctc ggcaaccctg ccgactcagc cggaaccggc
121 tcccggcccg aggggcgtgg tgtcctggtg ctccgactcc ttccgcaggc tccttgggac
181 ccgcggttcc gggagtccct tgctcagggt ccctttcctg cagtgaggcg ccgtccgcct
241 tccctgtgtc cccgcagacc cccatcatgg gcaataccag cagtgagcgc gccgcgctgg
301 agcggcatgg tggccataag acgccccgga gggacagctc ggggggcacc aaggacgggg
361 acaggcccaa gatcctgatg gacagccccg aagacgccga cctcttccac tccgaggaaa
421 tcaaggcacc agagaaggag gaattcctgg cctggcagca tgatctggaa gtgaatgata
481 aagctcccgc ccaggctcgg ccaacggtgt ttcgatggac ggggggcgga aaggaagttt
541 acttatctgg gtccttcaac aactggagta aacttcccct caccagaagc cacaataact
601 ttgtagccat cctggatctg ccggaaggag agcatcagta caagttcttt gtggatggtc
661 agtggacgca cgacccttcc gagcccatag taaccagcca gcttggcaca gttaacaaca
721 tcattcaagt gaagaaaact gactttgaag tatttgatgc tttaatggtg gattcccaaa
781 agtgctccga tgtgtctgag ctgtccagtt ctcccccagg accctaccat caggagccct
841 acgtctgcaa acccgaagag cgctttcggg caccccctat tctcccccca catctcctcc
901 aggtcatcct gaacaaggac acggggattt cctgtgatcc agctttgctt cctgagccca
961 atcacgtcat gctgaaccac ctatacgcgc tgtctatcaa ggatggagtg atggtgctca
1021 gcgcaaccca ccggtacaag aagaagtacg tcaccacctt gttatacaag cccatatgaa
1081 gagctggggg cggatggtgg cccaggagac agcacaccac caggctccac acgtgcatgc
1141 tttccccaag agggaatgga ctgtacattg ctcatttcac actcttcaga agacatttca
1201 tacctgccct ggtcctgctt gaaggtttgt ccaggcagag cagctcctgc agcgcctcgg
1261 tctgtgacag tcctcctagc acccccatgg ctttgagcct cggggactca tcaagtccaa
1321 gaaaagaggg aggggtggca gaggatctgc agccctggcc ccgcggtgca tgaggctggg
1381 tgcagttcta aacctacatt ctcgattttt cttaagccaa aaatgaatgc taactccttt
1441 gccagtaaaa ttctgggaaa cagggactga ggccacacat catttccagt catctgtgtg
1501 tttttaaggc cagccacttg tccctgttga ggcctggcta tggaactaaa tacagtgttg
1561 gtcttgcctg tccttcaaaa tcaacaacag attgtctctc ggctccaggg aggtgtcatt
1621 tctatagaaa ttagaagctt tctgatttct agatgaggtt ttacaattgt ttcttacagt
1681 catgtgcact aagtactctt tttgtaagca gaggtggctg gctctgcagc cttaaggcca
1741 ttttttaagt caccacgtct agaagtcaca tgaactctgc tcagcaataa tctgttctca
1801 gaacagactt ttcaacctgc tgccggattt ctccattcag ctggatgatc ctcaggactg
1861 accagttagc tggcaggttg tccagctttt tattccagtc ataataggtg acagtgttaa
1921 ccgtgaaaac ttgagaggca ctctgccctc ttccctataa aatcacacag cgtgatttta
1981 caaggtcccg tggcaccttg ctcaggacct ctgcccctag ttagcaagac tgcagcagtt
2041 gctgttgctt attctgaaag gaatgtagaa cttgacagca gccttctgag tctgggtcag
2101 gaagatgtcc tttggaccaa agcagacttc tgtatacgca gctcagtttc ccgggagtcg
2161 ccacagatgt acccactagc ccaggttgct gtgagtcagc ggaagctccc gttatgccct
2221 ttgctcctgg tgggagaggg aggagtgagc tccctgggtt ccagtattta cttggtatac
2281 ctgagtttgg gggtaccctt ttttgtgact tttcaaaaca gtgaattact gtcaccttga
2341 tggacaagtt tcaataaaac tttgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//