LOCUS BC001053 2726 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1, mRNA (cDNA clone IMAGE:3504722), partial cds.
ACCESSION BC001053
VERSION BC001053.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2726)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001053.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777599.
FEATURES Location/Qualifiers
source 1..2726
/db_xref="H-InvDB:HIT000085949"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3504722"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2726
/gene="PSMD1"
/gene_synonym="P112"
/gene_synonym="S1"
/db_xref="GeneID:5707"
CDS 120..>2726
/gene="PSMD1"
/gene_synonym="P112"
/gene_synonym="S1"
/codon_start=1
/product="PSMD1 protein"
/protein_id="AAH01053.1"
/db_xref="GeneID:5707"
/translation="MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDK
IEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA
KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRL
DVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQ
CLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIA
SVPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMA
IELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEW
LARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIH
ANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVT
GEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADAL
IESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGF
ILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY
VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAG
GHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMP
KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEV
DEAEKKEEKKKKK"
misc_feature 123..2627
/gene="PSMD1"
/gene_synonym="P112"
/gene_synonym="S1"
/note="RPN2; Region: COG5116, RPN2, 26S proteasome
regulatory complex component [Posttranslational
modification, protein turnover, chaperones]"
/db_xref="CDD:COG5116"
BASE COUNT 827 a 528 c 659 g 712 t
ORIGIN
1 gactgagcag cgcacccggg gagcaaggag gcgcggtgaa ctgagcggcc cctgagctga
61 cagatacact gcgcagctgg aacggcgagc gagccgacgg gcgagtgagg ggcgcagcca
121 tgatcacctc ggccgctgga attatttctc ttctggatga agatgaacca cagcttaagg
181 aatttgcact acacaaattg aatgcagttg ttaatgactt ctgggcagaa atttccgagt
241 ccgtagacaa aatagaggtt ttatacgaag atgaaggttt ccggagtcgg cagtttgcag
301 ccttagtggc atctaaagta ttttatcacc tgggggcttt tgaggagtct ctgaattatg
361 ctcttggagc aggggacctc ttcaatgtca atgataactc tgaatatgtg gaaactatta
421 tagcaaaatg cattgatcac tacaccaaac aatgtgtgga aaatgcagat ttgcctgaag
481 gagaaaaaaa accaattgac cagagattgg aaggcatcgt aaataaaatg ttccagcgat
541 gtctagatga tcacaagtat aaacaggcta ttggcattgc tctggagaca cgaagactgg
601 acgtctttga aaagaccata ctggagtcga atgatgtccc aggaatgtta gcttatagcc
661 ttaagctctg catgtcttta atgcagaata aacagtttcg gaataaagta ctaagagttc
721 tagttaaaat ctacatgaac ttggagaaac ctgatttcat caatgtttgt cagtgcttaa
781 ttttcttaga tgatcctcag gctgtgagtg atatcttaga gaaactggta aaggaagaca
841 acctcctgat ggcatatcag atttgttttg atttgtatga aagtgctagc cagcagtttt
901 tgtcatctgt aatccagaat cttcgaactg ttggcacccc tattgcttct gtgcctggat
961 ccactaatac gggtactgtt ccgggatcag agaaagacag tgactcgatg gaaacagaag
1021 aaaagacaag cagtgcattt gtaggaaaga caccagaagc cagtccagag cctaaggacc
1081 agactttgaa aatgattaaa attttaagtg gtgaaatggc tattgagtta catctgcagt
1141 tcttaatacg aaacaataat acagacctca tgattctaaa aaacacaaag gatgcagtac
1201 ggaattctgt atgtcatact gcaaccgtta tagcaaactc ttttatgcac tgtgggacaa
1261 ccagtgacca gtttcttaga gataatttgg aatggttagc cagagccact aactgggcaa
1321 aatttactgc tacagccagt ttgggtgtaa ttcataaggg tcatgaaaaa gaagcattac
1381 agttaatggc aacatacctt cccaaggata cttctccagg atcagcctat caggaaggtg
1441 gaggtctcta tgcactaggt cttattcatg ccaatcatgg tggtgatata attgactatc
1501 tgcttaatca gcttaagaac gccagcaatg atatcgttag acacggtggc agtctgggcc
1561 ttggtttggc agccatggga actgcacgtc aagatgttta tgatttgcta aaaacaaacc
1621 tttatcagga tgatgcagta acaggggaag cagctggcct ggccctaggt ttggttatgt
1681 tgggctctaa aaatgctcag gctattgagg acatggttgg ttatgcacaa gaaactcaac
1741 atgagaagat tctgcgtggt cttgcagttg gcatagcttt agtaatgtat gggaggatgg
1801 aagaggctga tgctctcatt gaatctctct gtcgtgacaa ggacccaatt cttcgaaggt
1861 ctggaatgta tactgtagcc atggcttatt gtggctctgg taacaacaaa gcaattcgac
1921 gcctgctaca tgttgctgta agtgatgtta atgatgatgt caggagggca gcagtagaat
1981 cacttgggtt cattctattc agaacccctg aacagtgccc aagtgttgtc tctttgttgt
2041 cagagagtta caaccctcat gtgcgctacg gagctgcaat ggccttgggg atatgctgtg
2101 ctggtacagg aaacaaggaa gccattaatt tgctagaacc aatgacaaac gaccccgtga
2161 actacgtgag gcaaggggca ctcatagctt cagctctcat catgatccag cagactgaaa
2221 tcacttgtcc aaaggtgaat cagttcagac agctgtattc caaagtcatc aatgataagc
2281 atgatgatgt catggccaag tttggcgcta ttctggccca gggcatactg gatgcaggtg
2341 gtcataatgt cacaatctcc ttgcagtcca ggactgggca tactcatatg ccttctgtgg
2401 ttggcgtcct tgtatttacc cagttttggt tctggtttcc tctttcacac ttcctgtcat
2461 tggcttatac ccctacctgt gtcattggcc ttaacaagga cttaaagatg ccgaaagttc
2521 agtataaatc gaactgtaaa ccatccacat ttgcatatcc tgcccctctg gaagtaccaa
2581 aagaaaaaga aaaggaaaag gtttctactg ctgtattatc tataactgcc aaggctaaaa
2641 agaaggaaaa agaaaaggaa aaaaaggagg aggagaaaat ggaagtggat gaggcagaga
2701 aaaaggagga aaaaaaaaaa aaaaaa
//