LOCUS BC001050 3716 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3, mRNA (cDNA clone MGC:1495 IMAGE:3505967),
complete cds.
ACCESSION BC001050
VERSION BC001050.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3716)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001050.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27886560.
FEATURES Location/Qualifiers
source 1..3716
/db_xref="H-InvDB:HIT000030102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1495 IMAGE:3505967"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3716
/gene="NFATC3"
/gene_synonym="NFAT4"
/gene_synonym="NFATX"
/db_xref="GeneID:4775"
/db_xref="HGNC:HGNC:7777"
/db_xref="MIM:602698"
CDS 35..3262
/gene="NFATC3"
/gene_synonym="NFAT4"
/gene_synonym="NFATX"
/codon_start=1
/product="nuclear factor of activated T-cells,
cytoplasmic, calcineurin-dependent 3"
/protein_id="AAH01050.1"
/db_xref="GeneID:4775"
/db_xref="HGNC:HGNC:7777"
/db_xref="MIM:602698"
/translation="MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASI
YIFNVDPPPSTLTTPLCLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGG
PKPFECPSIQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEPSYRES
SLSPSPASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGG
CPGEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRPTSPCGKRRH
SSAEVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFPFQYCVET
DIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLKKDSCGDQF
LSVPSPFTWSKPKPGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHHRAHYETE
GSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVAT
ASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRL
VFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSN
FLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYL
CNGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSV
LSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPV
GSSYQPMQTNVVYNGPTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHS
SNSGSTGHLLAHTPHSVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPIT
YGPSHSGSATTASPAASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSG
QHSTQAQSTGQGGLSAPSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQD
ITLDDVNEIIGRDMSQISVSQGAGVSRQAPLPSPESLDLGRSDGL"
BASE COUNT 977 a 927 c 786 g 1026 t
ORIGIN
1 ctgaggagga gctgcagcac cctgggccac gccgatgact actgcaaact gtggcgccca
61 cgacgagctc gacttcaaac tcgtctttgg cgaggacggg gcgccggcgc cgccgccccc
121 gggctcgcgg cctgcagatc ttgagccaga tgattgtgca tccatttaca tctttaatgt
181 agatccacct ccatctactt taaccacacc actttgctta ccacatcatg gattaccgtc
241 tcactcttct gttttgtcac catcgtttca gctccaaagt cacaaaaact atgaaggaac
301 ttgtgagatt cctgaatcta aatatagccc attaggtggt cccaaaccct ttgagtgccc
361 aagtattcaa attacatcta tctctcctaa ctgtcatcaa gaattagatg cacatgaaga
421 tgacctacag ataaatgacc cagaacggga atttttggaa aggccttcta gagatcatct
481 ctatcttcct cttgagccat cctaccggga gtcttctctt agtcctagtc ctgccagcag
541 catctcttct aggagttggt tctctgatgc atcttcttgt gaatcgcttt cacatattta
601 tgatgatgtg gactcagagt tgaatgaagc tgcagcccga tttacccttg gatcccctct
661 gacttctcct ggtggctctc cagggggctg ccctggagaa gaaacttggc atcaacagta
721 tggacttgga cactcattat cacccaggca atctccttgc cactctccta gatccagtgt
781 cactgatgag aattggctga gccccaggcc agcctcagga ccctcatcaa ggcccacatc
841 cccctgtggg aaacggaggc actccagtgc tgaagtttgt tatgctgggt ccctttcacc
901 ccatcactca cctgttcctt cacctggtca ctcccccagg ggaagtgtga cagaagatac
961 gtggctcaat gcttctgtcc atggtgggtc aggccttggc cctgcagttt ttccatttca
1021 gtactgtgta gagactgaca tccctctcaa aacaaggaaa acttctgaag atcaagctgc
1081 catactacca ggaaaattag agctgtgttc agatgaccaa gggagtttat caccagcccg
1141 ggagacttca atagatgatg gccttggatc tcagtatcct ttaaagaaag attcatgtgg
1201 tgatcagttt ctttcagttc cttcaccctt tacctggagc aaaccaaagc ctggccacac
1261 ccctatattt cgcacatctt cattacctcc actagactgg cctttaccag ctcattttgg
1321 acaatgtgaa ctgaaaatag aagtgcaacc taaaactcat catcgagccc attatgaaac
1381 tgaaggtagc cgaggggcag taaaagcatc tactggggga catcctgttg tgaagctcct
1441 gggctataac gaaaagccaa taaatctaca aatgtttatt gggacagcag atgatcgata
1501 tttacgacct catgcatttt accaggtgca tcgaatcact gggaagacag tcgctactgc
1561 aagccaagag ataataattg ccagtacaaa agttctggaa attccacttc ttcctgaaaa
1621 taatatgtca gccagtattg attgtgcagg tattttgaaa ctccgcaatt cagatataga
1681 acttcgaaaa ggagaaactg atattggcag aaagaatact agagtacgac ttgtgtttcg
1741 tgtacacatc ccacagccca gtggaaaagt cctttctctg cagatagcct ctatacccgt
1801 tgagtgctcc cagcggtctg ctcaagaact tcctcatatt gagaagtaca gtatcaacag
1861 ttgttctgta aatggaggtc atgaaatggt tgtgactgga tctaattttc ttccagaatc
1921 caaaatcatt tttcttgaaa aaggacaaga tggacgacct cagtgggagg tagaagggaa
1981 gataatcagg gaaaaatgtc aaggggctca cattgtcctt gaagttcctc catatcataa
2041 cccagcagtt acagctgcag tgcaggtgca cttttatctt tgcaatggca agaggaaaaa
2101 aagccagtct caacgtttta cttatacacc agttttgatg aagcaagaac acagagaaga
2161 gattgatttg tcttcagttc catctttgcc tgtgcctcat cctgctcaga cccagaggcc
2221 ttcctctgat tcagggtgtt cacatgacag tgtactgtca ggacagagaa gtttgatttg
2281 ctccatccca caaacatatg catccatggt gacctcatcc catctgccac agttgcagtg
2341 tagagatgag agtgttagta aagaacagca tatgattcct tctccaattg tacaccagcc
2401 ttttcaagtc acaccaacac ctcctgtggg gtcttcctat cagcctatgc aaactaatgt
2461 tgtgtacaat ggaccaactt gtcttcctat taatgctgcc tctagtcaag aatttgattc
2521 agttttgttt cagcaggatg caactctttc tggtttagtg aatcttggct gtcaaccact
2581 gtcatccata ccatttcatt cttcaaattc aggctcaaca ggacatctct tagcccatac
2641 acctcattct gtgcataccc tgcctcatct gcaatcaatg ggatatcatt gttcaaatac
2701 aggacaaaga tctctttctt ctccagtggc tgaccagatt acaggtcagc cttcgtctca
2761 gttacaacct attacatatg gtccttcaca ttcagggtct gctacaacag cttccccagc
2821 agcttctcat cccttggcta gttcaccgct ttctgggcca ccatctcctc agcttcagcc
2881 tatgccttac caatctccta gctcaggaac tgcctcatca ccgtctccag ccaccagaat
2941 gcattctgga cagcactcaa ctcaagcaca aagtacgggc caggggggtc tttctgcacc
3001 ttcatcctta atatgtcaca gtttgtgtga tccagcgtca tttccacctg atggggcaac
3061 tgtgagcatt aaacctgaac cagaagatcg agagcctaac tttgcaacca ttggtctgca
3121 ggacatcact ttagatgatg tgaacgagat aattgggaga gacatgtccc agatttctgt
3181 ttcccaagga gcaggggtga gcaggcaggc tcccctcccg agtcctgagt ccctggattt
3241 aggaagatct gatgggctct aacagtgctt actgcagcct tgtgtccacc accaacttct
3301 cagcatgttt ctctccttgg accttgggtt tccaactctg cagccttcag gtctggggcc
3361 aggagtggga cccaccattt gtggggaaag tagcattcct ccacctcagg ccttgggtag
3421 atttggcaaa agaacaggag cagcataggc tgtttgagct ttggggaaat gaactttgct
3481 ttttatattt aactaggata cttttatatg atgggtgctt tgagtgtgaa tgcagcaggc
3541 tctcttgttt ccgaggtgct gcttttgcag gtgacctggt tacttagcta ggattggtga
3601 tttgtactgc tttatggtca tttgaagggc cctttagttt ttatgataat ttttaaaata
3661 ggaacttttg ataagacctt ctagaagcaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//