LOCUS BC001021 1035 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosducin-like 3, mRNA (cDNA clone MGC:3062
IMAGE:3344703), complete cds.
ACCESSION BC001021
VERSION BC001021.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1035)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1035)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001021.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51944951.
FEATURES Location/Qualifiers
source 1..1035
/db_xref="H-InvDB:HIT000030074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3062 IMAGE:3344703"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1035
/gene="PDCL3"
/gene_synonym="HTPHLP"
/gene_synonym="MGC3062"
/gene_synonym="VIAF1"
/db_xref="GeneID:79031"
/db_xref="HGNC:HGNC:28860"
CDS 92..811
/gene="PDCL3"
/gene_synonym="HTPHLP"
/gene_synonym="MGC3062"
/gene_synonym="VIAF1"
/codon_start=1
/product="phosducin-like 3"
/protein_id="AAH01021.1"
/db_xref="GeneID:79031"
/db_xref="HGNC:HGNC:28860"
/translation="MQDPNADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSV
VKTYEDMTLEELEDHEDEFNEEDERAIEMYRRRRLAEWKATKLKNKFGEVLEISGKDY
VQEVTKAGEGLWVILHLYKQGIPLCALINQHLSGLARKFPDVKFIKAISTTCIPNYPD
RNLPTIFVYLEGDIKAQFIGPLVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIED
VLLSSVRRSVLMKRDSDSEGD"
BASE COUNT 320 a 187 c 264 g 264 t
ORIGIN
1 ggcgtggcgg cgctgtgcgc gtgcacaaaa gagagctgag gggcgggggc gctgcggcac
61 agctggtttg agcaactgaa ctggaaacaa gatgcaggac cccaacgcag acactgaatg
121 gaatgacatc ttacgcaaaa agggtatctt accccccaag gaaagtctga aagaattgga
181 agaggaggca gaagaggagc agcgcatcct ccagcagtca gtggtgaaaa catatgaaga
241 tatgactttg gaagagctgg aggatcatga agacgagttt aatgaggagg atgaacgtgc
301 tattgaaatg tacagacggc ggagactggc tgagtggaaa gcaactaaac tgaagaataa
361 attcggagaa gttttggaga tctcagggaa ggattatgtt caagaagtta ccaaagctgg
421 cgagggcttg tgggtcatct tgcaccttta caaacaagga attcccctct gtgccctgat
481 aaatcagcac ctcagtggac ttgccaggaa gtttcctgat gtcaaattta tcaaagccat
541 ttcaacaacc tgcataccca attatcctga taggaatctg cccacgatat ttgtttacct
601 ggaaggagat atcaaggctc agtttattgg tcctctggtg tttggcggca tgaacctgac
661 aagagatgag ttggaatgga aactgtctga atctggagca attatgacag acctggagga
721 aaaccctaag aagccgattg aagacgtgtt gctgtcctca gtgcggcgct ctgtcctcat
781 gaagagggac agcgattccg agggtgactg aggctacagc ttctatcaca tgccgaactt
841 tcttgtgaca aattgtctgg attttttaaa aaaggaaaaa gcaagaatga atccttgtgg
901 tttttagttt tgtataaatt atgtttcaaa tctttacatt ttggaaataa tcattgctgg
961 agattctgtt aaatattttg gaactctttt tttttttaaa ttatagtatt tcctctaaaa
1021 aaaaaaaaaa aaaaa
//