LOCUS BC001020 789 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens seryl-tRNA synthetase 2, mitochondrial, mRNA (cDNA
clone IMAGE:3344450), partial cds.
ACCESSION BC001020
VERSION BC001020.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 789)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 789)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC001020.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: n Column: 11.
FEATURES Location/Qualifiers
source 1..789
/db_xref="H-InvDB:HIT000085948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3344450"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..789
/gene="SARS2"
/gene_synonym="mtSerRS"
/gene_synonym="SARS"
/gene_synonym="SerRSmt"
/gene_synonym="SERS"
/gene_synonym="SYS"
/db_xref="GeneID:54938"
/db_xref="HGNC:HGNC:17697"
CDS <1..429
/gene="SARS2"
/gene_synonym="mtSerRS"
/gene_synonym="SARS"
/gene_synonym="SerRSmt"
/gene_synonym="SERS"
/gene_synonym="SYS"
/codon_start=1
/product="SARS2 protein"
/protein_id="AAH01020.2"
/db_xref="GeneID:54938"
/db_xref="HGNC:HGNC:17697"
/translation="EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVT
SASNCTDFQSRRLHIMFQTEAGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVP
PALQSYLGTDRITAPTHVPLQYIGPNQPRKPGLPGQPAVS"
BASE COUNT 165 a 268 c 201 g 155 t
ORIGIN
1 gagatcttga cagagctggg cttgcacttc cgggtcctgg atatgcccac ccaagaactg
61 ggcctccccg cctaccgcaa gtttgacatt gaggcctgga tgccaggccg aggccgcttt
121 ggagaggtca ccagtgcttc caactgcaca gacttccaga gccgccgcct ccacatcatg
181 ttccagaccg aggctgggga gctgcagttt gcccacacgg tgaacgccac cgcctgtgct
241 gtcccccgcc ttctcatcgc gctcctggag agtaaccagc agaaggacgg ctcagtgctc
301 gtgccccctg ccctccagtc ctacctcggc actgatcgga tcacagcccc tacccacgtg
361 cctctccagt acatcggccc caaccagccc cggaagcctg ggctgcctgg ccagcctgct
421 gtaagctaag aacccaccca cagcagccct cgggggtgtc actgcttcct ggagttcagg
481 agaccccgga cacctgggac ctgtgttcct gagcccgtcc tgacatctgt gttcttcctg
541 tcagctccac gcccgggccc ctggaccacg gggtccacct ctcctctgtc cttgctgcct
601 cagagtcagt cactgaccct gttatcattg agggtcccag tgggaagcag gacgtctggg
661 ctttacggtt ctagggacag gagaagcaga ggaagaggct tccatccctc cttccttctt
721 tcctcctaca gtgctgagca aaaagtcccc aataaatggt caggacaaaa aaaaaaaaaa
781 aaaaaaaaa
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