LOCUS BC001014 1369 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+
dependent) 1, methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase, mRNA (cDNA clone IMAGE:3344724),
partial cds.
ACCESSION BC001014
VERSION BC001014.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1369)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1369)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC001014.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..1369
/db_xref="H-InvDB:HIT000085946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3344724"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1369
/gene="MTHFD1"
/db_xref="GeneID:4522"
/db_xref="MIM:172460"
CDS <1..1093
/gene="MTHFD1"
/codon_start=2
/product="MTHFD1 protein"
/protein_id="AAH01014.2"
/db_xref="GeneID:4522"
/db_xref="MIM:172460"
/translation="LALTTSLEDMRERLGKMVVASSKKGEPVSAEDLGVSGALTVLMK
DAIKPNLMQTLEGTPVFVHAGPFANIAHGNSSIIADQIALKLVGPEGFVVTEAGFGAD
IGMEKFFNIKCRYSGLCPHVVVLVATVRALKMHGGGPTVTAGLPLPKAYIQENLELVE
KGFSNLKKQIENARMFGIPVVVAVNAFKTDTESELDLISRLSREHGAFDAVKCTHWAE
GGKGALALAQAVQRAAQAPSSFQLLYDLKLPVEDKIRIIAQKIYGADDIELLPEAQHK
AEVYTKQGFGNLPICMAKTHLSLSHNPEQKGVPTGFILPIRDIRASVGAGFLYPLVGT
MSTMPGLPTRPCFYDIDLDPETEQVNGLF"
BASE COUNT 392 a 330 c 333 g 314 t
ORIGIN
1 cctggctctc accacttctc tagaagacat gagagagaga ctgggcaaaa tggtggtggc
61 atccagtaag aaaggagagc ccgtcagtgc cgaagatctg ggggtgagtg gtgcactgac
121 agtgcttatg aaggacgcaa tcaagcccaa tctcatgcag acactggagg gcactccagt
181 gtttgtccat gctggcccgt ttgccaacat cgcacatggc aattcctcca tcattgcaga
241 ccagatcgca ctcaagcttg ttggcccaga agggtttgta gtgacggaag caggatttgg
301 agcagacatt ggaatggaaa agttttttaa catcaaatgc cggtattccg gcctctgccc
361 ccacgtggtg gtgcttgttg ccactgtcag ggctctcaag atgcacgggg gcggccccac
421 ggtcactgct ggactgcctc ttcccaaggc ttacatacag gagaacctgg agctggttga
481 aaaaggcttc agtaacttga agaaacaaat tgaaaatgcc agaatgtttg gaattccagt
541 agtagtggcc gtgaatgcat tcaagacgga tacagagtct gagctggacc tcatcagccg
601 cctttccaga gaacatgggg cttttgatgc cgtgaagtgc actcactggg cagaaggggg
661 caagggtgcc ttagccctgg ctcaggccgt ccagagagca gcacaagcac ccagcagctt
721 ccagctcctt tatgacctca agctcccagt tgaggataaa atcaggatca ttgcacagaa
781 gatctatgga gcagatgaca ttgaattact tcccgaagct caacacaaag ctgaagtcta
841 cacgaagcag ggctttggga atctccccat ctgcatggct aaaacacact tgtctttgtc
901 tcacaaccca gagcaaaaag gtgtccctac aggcttcatt ctgcccattc gcgacatccg
961 cgccagcgtt ggggctggtt ttctgtaccc cttagtagga acgatgagca caatgcctgg
1021 actccccacc cggccctgtt tttatgatat tgatttggac cctgaaacag aacaggtgaa
1081 tggattattc taaacagatc accatccatc ttcaagaagc tactttgaaa gtctggccag
1141 tgtctattca ggcccactgg gagttaggaa gtataagtaa gccaagagaa gtcagcccct
1201 gcccagaaga tctgaaacta atagtaggag tttccccaga agtcattttc agccttaatt
1261 ctcatcatgt ataaattaac ataaatcatg catgtctgtt tactttagtg acgttccaca
1321 gaataaaagg aaacaagttt gcaaaaaaaa aaaaaaaaaa aaaaaaaaa
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