LOCUS BC001011 1724 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa, mRNA (cDNA clone MGC:8697 IMAGE:2964685), complete cds. ACCESSION BC001011 VERSION BC001011.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1724) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1724) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001011.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: p Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557490. FEATURES Location/Qualifiers source 1..1724 /db_xref="H-InvDB:HIT000030067" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8697 IMAGE:2964685" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1724 /gene="CSTF1" /gene_synonym="CstF-50" /gene_synonym="CstFp50" /db_xref="GeneID:1477" /db_xref="HGNC:HGNC:2483" /db_xref="MIM:600369" CDS 90..1385 /gene="CSTF1" /gene_synonym="CstF-50" /gene_synonym="CstFp50" /codon_start=1 /product="cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa" /protein_id="AAH01011.1" /db_xref="GeneID:1477" /db_xref="HGNC:HGNC:2483" /db_xref="MIM:600369" /translation="MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVC APSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETC YVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNM ENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAE MLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANM YVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWE ISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLL SLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRSTTD" BASE COUNT 472 a 409 c 382 g 461 t ORIGIN 1 attcgcgcct ccatttttcc aggagagagc gggataccaa gagaaccgga ccagctgctg 61 gcagggaaac tgtcttcctt ttctccaaga tgtacagaac caaagtgggc ttgaaggacc 121 gccagcagct ctacaagctg atcattagcc agctgctata tgacggctac atcagcatcg 181 ccaatggcct catcaatgaa atcaagcctc agtctgtgtg tgcaccctcg gagcagctcc 241 tgcatctcat caaactcgga atggaaaacg atgacaccgc agttcagtat gcaattggtc 301 gttcagatac tgttgcccct ggcacaggga ttgacctgga atttgatgca gatgttcaga 361 ctatgtcccc agaggcttct gagtacgaaa catgctatgt cacatcacat aaaggaccat 421 gccgtgtagc tacctatagt agagatggac agttaatagc tactgggtct gctgatgctt 481 cgataaagat acttgacaca gagaggatgt tggccaaaag tgccatgcca atagaggtca 541 tgatgaatga gaccgcacaa caaaatatgg aaaaccaccc agtgattcga actctttatg 601 accatgtgga tgaagtcacg tgccttgctt tccacccaac agaacagatc ctggcttctg 661 gttcaaggga ttatactctt aaattatttg attattccaa accatcagca aaaagagcct 721 tcaaatacat tcaggaagct gaaatgttac gttccatctc ttttcatcct tctggagact 781 ttatacttgt cggaactcag catcctactc ttcgccttta tgatatcaac acctttcaat 841 gttttgtctc ttgcaatcct caagatcaac acaccgatgc tatatgttcc gttaattaca 901 attctagtgc caatatgtac gtaactggaa gcaaggacgg ctgcatcaaa ttatgggatg 961 gtgtttcaaa tcgatgcatc acaacttttg agaaagcaca tgacggtgct gaagtttgtt 1021 ctgccatttt ttccaaaaat tctaaataca ttctctcaag tggaaaagac tctgtagcta 1081 aactttggga aatatcaacg ggacgaacac tggtcagata cacgggcgcg ggtttaagtg 1141 gacgccaggt gcaccggaca caggctgtgt ttaaccacac cgaggactat gtgttgctgc 1201 ccgacgagag gacgatcagt ctttgctgct gggactcgag gacagccgag cggagaaacc 1261 tgctgtcgtt ggggcacaac aatattgtac gctgcatagt gcactccccc accaaccccg 1321 ggttcatgac gtgcagcgat gacttcagag cgcggttttg gtaccggaga tcgaccactg 1381 actgagccac cctctccgta gggttctttc tcgaggactc taccctcctc ccccacgtcc 1441 tgtctcagct gcagtcgtaa gtccgtgcac catccttgac gttttgctgc cacctctgtc 1501 cacattcttc ttggatttgt ataaaagaat ctttttttac cttgatgtag aatcatggtg 1561 gaaaaagttg gaaacacaga tctgtgcagt tctacattca ctgattatta cagtgtgatt 1621 ttcatcggtt ttgtaagtac aggacttgcc gtttcttttg atctcttgat tgaaggagga 1681 tagggcatta aagtgctttt gacatgaaaa aaaaaaaaaa aaaa //