LOCUS BC000995 1309 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stratifin, mRNA (cDNA clone MGC:5018 IMAGE:3445915),
complete cds.
ACCESSION BC000995
VERSION BC000995.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1309)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1309)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC000995.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45238846.
FEATURES Location/Qualifiers
source 1..1309
/db_xref="H-InvDB:HIT000030054"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5018 IMAGE:3445915"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1309
/gene="SFN"
/db_xref="GeneID:2810"
/db_xref="HGNC:HGNC:10773"
/db_xref="MIM:601290"
CDS 49..795
/gene="SFN"
/codon_start=1
/product="stratifin"
/protein_id="AAH00995.1"
/db_xref="GeneID:2810"
/db_xref="HGNC:HGNC:10773"
/db_xref="MIM:601290"
/translation="MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLL
SVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGL
LDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKK
EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTL
IMQLLRDNLTLWTADNAGEEGGEAPQEPQS"
BASE COUNT 270 a 406 c 407 g 226 t
ORIGIN
1 gtcccaggca gcagttagcc cgccgcccgc ctgtgtgtcc ccagagccat ggagagagcc
61 agtctgatcc agaaggccaa gctggcagag caggccgaac gctatgagga catggcagcc
121 ttcatgaaag gcgccgtgga gaagggcgag gagctctcct gcgaagagcg aaacctgctc
181 tcagtagcct ataagaacgt ggtgggcggc cagagggctg cctggagggt gctgtccagt
241 attgagcaga aaagcaacga ggagggctcg gaggagaagg ggcccgaggt gcgtgagtac
301 cgggagaagg tggagactga gctccagggc gtgtgcgaca ccgtgctggg cctgctggac
361 agccacctca tcaaggaggc cggggacgcc gagagccggg tcttctacct gaagatgaag
421 ggtgactact accgctacct ggccgaggtg gccaccggtg acgacaagaa gcgcatcatt
481 gactcagccc ggtcagccta ccaggaggcc atggacatca gcaagaagga gatgccgccc
541 accaacccca tccgcctggg cctggccctg aacttttccg tcttccacta cgagatcgcc
601 aacagccccg aggaggccat ctctctggcc aagaccactt tcgacgaggc catggctgat
661 ctgcacaccc tcagcgagga ctcctacaaa gacagcaccc tcatcatgca gctgctgcga
721 gacaacctga cactgtggac ggccgacaac gccggggaag aggggggcga ggctccccag
781 gagccccaga gctgagtgtt gcccgccacc gccccgccct gccccctcca gtcccccacc
841 ctgccgagag gactagtatg gggtgggagg ccccaccctt ctcccctagg cgctgttctt
901 gctccaaagg gctccgtgga gagggactgg cagagctgag gccacctggg gctggggatc
961 ccactcttct tgcagctgtt gagcgcacct aaccactggt catgccccca cccctgctct
1021 ccgcacccgc ttcctcccga ccccaggacc aggctacttc tcccctcctc ttgcctccct
1081 cctgcccctg ctgcctctga tcgtaggaat tgaggagtgt cccgccttgt ggctgagaac
1141 tggacagtgg caggggctgg agatgggtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
1201 gtgcgcgcgc gccagtgcaa gaccgagatt gagggaaagc atgtctgctg ggtgtgacca
1261 tgtttcctct caataaagtt cccctgtgac actcaaaaaa aaaaaaaaa
//