LOCUS BC000964 2031 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ornithine aminotransferase (gyrate atrophy), mRNA
(cDNA clone MGC:5182 IMAGE:3449883), complete cds.
ACCESSION BC000964
VERSION BC000964.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2031)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On May 25, 2001 this sequence version replaced BC000964.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557808.
FEATURES Location/Qualifiers
source 1..2031
/db_xref="H-InvDB:HIT000030031"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5182 IMAGE:3449883"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2031
/gene="OAT"
/gene_synonym="HOGA"
/db_xref="GeneID:4942"
/db_xref="HGNC:HGNC:8091"
/db_xref="MIM:258870"
CDS 62..1381
/gene="OAT"
/gene_synonym="HOGA"
/codon_start=1
/product="ornithine aminotransferase (gyrate atrophy)"
/protein_id="AAH00964.1"
/db_xref="GeneID:4942"
/db_xref="HGNC:HGNC:8091"
/db_xref="MIM:258870"
/translation="MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIF
EREYKYGAHNYHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALK
SQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTV
KGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERA
LQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL
AVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAI
AALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWK
VCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILSF"
BASE COUNT 585 a 373 c 449 g 624 t
ORIGIN
1 gcgtgtaccc ggttgtcctc aggcgctgtc agatctgtgg tttttctact tgaaggacac
61 aatgttttcc aaactagcac atttgcagag gtttgctgta cttagtcgcg gagttcattc
121 ttcagtggct tctgctacat ctgttgcaac taaaaaaaca gtccaaggcc ctccaacctc
181 tgatgacatt tttgaaaggg aatataagta tggtgcacac aactaccatc ctttacctgt
241 agccctggag agaggaaaag gtatttactt atgggatgta gaaggcagaa aatattttga
301 cttcctgagt tcttacagtg ctgtcaacca agggcattgt caccccaaga ttgtgaatgc
361 tctgaagagt caagtggaca aattgacctt aacatctaga gctttctata ataacgtact
421 tggtgaatat gaggagtata ttactaaact tttcaactac cacaaagttc ttcctatgaa
481 tacaggagtg gaggctggag agactgcctg taaactagct cgtaagtggg gctataccgt
541 gaagggcatt cagaaataca aagcaaagat tgtttttgca gctgggaact tctggggtag
601 gacgttgtct gctatctcca gttccacaga cccaaccagt tacgatggtt ttggaccatt
661 tatgccggga ttcgacatca ttccctataa tgatctgccc gcactggagc gtgctcttca
721 ggatccaaat gtggctgcgt tcatggtaga accaattcag ggtgaagcag gcgttgttgt
781 tccggatcca ggttacctaa tgggagtgcg agagctctgc accaggcacc aggttctctt
841 tattgctgat gaaatacaga caggattggc cagaactggt agatggctgg ctgttgatta
901 tgaaaatgtc agacctgata tagtcctcct tggaaaggcc ctttctgggg gcttataccc
961 tgtgtctgca gtgctgtgtg atgatgacat catgctgacc attaagccag gggagcatgg
1021 gtccacatac ggtggcaatc cactaggctg ccgagtggcc atcgcagccc ttgaggtttt
1081 agaagaagaa aaccttgctg aaaatgcaga caaattgggc attatcttga gaaatgaact
1141 catgaagcta ccttctgatg ttgtaactgc cgtaagagga aaaggattat taaatgctat
1201 tgtcattaaa gaaaccaaag attgggatgc ttggaaggtg tgtctacgac ttcgagataa
1261 tggacttctg gccaagccaa cccatggcga cattatcagg tttgcgcctc cgctggtgat
1321 caaggaggat gagcttcgag agtccattga aattattaac aagaccatct tgtctttctg
1381 agggtagcca gctgttttca gtggtccctg ggagccagct ggagacaggt ggtcctgtaa
1441 aagctttatt cctaatgtgg gcacattcca ctcccatgag tcttcaaaaa cttttttttt
1501 gaatatattt ttttcagttg atacataata gaacaacgtt tatgaacctg ccgtttgctt
1561 tgtaacgtaa ctaaataatg taatggcatc tatattcagt tgaagtgttt tgatgtgcat
1621 gtgtacttcc taaggtgaaa tgcatctata tacagacagc ctctaaatca agtccttcag
1681 tataattgat atatgttttt ataatttcct cactggtata agtgtttcat atttgaaaaa
1741 gttatctctg ggtattgcat aaaaggcttc atcttataaa gtgaaatcat tgttattgaa
1801 ttttaggaag gattaatggt taagtgtata taaaatacta atattaagta aacttcatat
1861 tggccaacac cagggttgta ttctatggat gtcattattt tgaattaaga attagtgttt
1921 aacattccta aattgttttg agtgcttgat tataatttgt aaaaaatgtt tattttcaat
1981 acttctttaa atttaaaata aagcttatat ttcaaaaaaa aaaaaaaaaa a
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