LOCUS BC000954 1833 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromobox homolog 3 (HP1 gamma homolog, Drosophila),
mRNA (cDNA clone MGC:4912 IMAGE:3450099), complete cds.
ACCESSION BC000954
VERSION BC000954.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1833)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1833)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: l Column: 12.
FEATURES Location/Qualifiers
source 1..1833
/db_xref="H-InvDB:HIT000030026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4912 IMAGE:3450099"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1833
/gene="CBX3"
/gene_synonym="HECH"
/gene_synonym="HP1-GAMMA"
/gene_synonym="HP1Hs-gamma"
/db_xref="GeneID:11335"
/db_xref="HGNC:HGNC:1553"
/db_xref="MIM:604477"
CDS 112..663
/gene="CBX3"
/gene_synonym="HECH"
/gene_synonym="HP1-GAMMA"
/gene_synonym="HP1Hs-gamma"
/codon_start=1
/product="chromobox homolog 3 (HP1 gamma homolog,
Drosophila)"
/protein_id="AAH00954.1"
/db_xref="GeneID:11335"
/db_xref="HGNC:HGNC:1553"
/db_xref="MIM:604477"
/translation="MASNKTTLQKMGKKQNGKSKKVEEAEPEEFVVEKVLDRRVVNGK
VEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS
KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKC
PQIVIAFYEERLTWHSCPEDEAQ"
BASE COUNT 626 a 294 c 359 g 554 t
ORIGIN
1 cgctgaggag actccggtca ctgtcctcgc cccgcctccc ccttccctcc ccttggggac
61 caccgggcgc cacgccgcga acgtaatagc tcttcaagtc tgcaataaaa aatggcctcc
121 aacaaaacta cattgcaaaa aatgggaaaa aaacagaatg gaaagagtaa aaaagttgaa
181 gaggcagagc ctgaagaatt tgtcgtggaa aaagtactag atcgacgtgt agtgaatggg
241 aaagtggaat atttcctgaa gtggaaggga tttacagatg ctgacaatac ttgggaacct
301 gaagaaaatt tagattgtcc agaattgatt gaagcgtttc ttaactctca gaaagctggc
361 aaagaaaaag atggtacaaa aagaaaatct ttatctgaca gtgaatctga tgacagcaaa
421 tcaaagaaga aaagagatgc tgctgacaaa ccaagaggat ttgccagagg tcttgatcct
481 gaaagaataa ttggtgccac agacagcagt ggagaattga tgtttctcat gaaatggaaa
541 gattcagatg aggcagactt ggtgctggcg aaagaggcaa atatgaagtg tcctcaaatt
601 gtaattgctt tttatgaaga gagactaact tggcattctt gtccagaaga tgaagctcaa
661 taattgttca cattgttctt ttatatatat ttatatatat atataaaaat tgggtcttag
721 attttgattt actagtgtga caaaataact acatcctaat gaaaatcaag tttgatatgt
781 ttgttttgaa agtagcgttg gaagagttgt tgggggtttt ttgcatccat agcactggtt
841 actttgaaca aataaataaa agctttctgt agttgcttcc tttatcagaa aagaacattt
901 gataccatgg tatatcattt cctcttcatt aaagaacagc ttttctaaat gttgggggaa
961 atgtccatag tcattactca gtcaaaactt gtgttctcat gagcctaagg accattctag
1021 atttattacg tgttttgtgt gtgtgtgtgt gtgtgtgtgt gtgtatccat aaaatgcata
1081 tgtaaatttt tttttgtttt taagcattca cccaaacaaa aaaatcacag gtaaacccat
1141 gtttctgaga tgccattatt ccaagcaaaa taagagataa tcccttcaag ttaaattgaa
1201 aattttcctg aaaccataca tttcaagtga aataagtaat tctagatagg acaatttaaa
1261 ttggataatt ttaaagtgtc tataattgca gtggtttatt tgcaaaattc ctaaaaggaa
1321 aaattttatc actgccatca cagcaggttt cctcatccag atgaggaaac tagacaaatg
1381 ctagtgtgtt ttaactagct aaacaaaact aagttaaatg aacatttaaa agtttcccta
1441 gcgggccatt ccttagcaaa atgttggaat ccctgttgct acattgacta aaaggtcatg
1501 atgaatggaa tatgtaagac ttggctcata gaaacctaat cagatggtta gaggtgttgg
1561 cagtttagga cctgctgtca taaatgtgtg aacaaccttt tgtaacctaa cctattgacc
1621 tgcatgtttt ttctttaccc caattcatta catggaggct caatcttgag tttgctttac
1681 tggttcagca aaagccagga agaacaactt tgtagtaatc aaaatgttat ccaactgtat
1741 attgtttact ttattgtaaa tactggtgaa cagtggttaa taaatagttt tatattcctt
1801 tatgcaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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