LOCUS       BC000915                1462 bp    mRNA    linear   HUM 04-AUG-2008
DEFINITION  Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:5344
            IMAGE:2985229), complete cds.
ACCESSION   BC000915
VERSION     BC000915.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1462)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Jul 12, 2001 this sequence version replaced BC000915.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 3 Row: l Column: 7.
FEATURES             Location/Qualifiers
     source          1..1462
                     /db_xref="H-InvDB:HIT000030002"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:5344 IMAGE:2985229"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_10"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1462
                     /gene="PDLIM1"
                     /gene_synonym="CLP-36"
                     /gene_synonym="CLP36"
                     /gene_synonym="hCLIM1"
                     /db_xref="GeneID:9124"
                     /db_xref="HGNC:HGNC:2067"
                     /db_xref="MIM:605900"
     CDS             110..1099
                     /gene="PDLIM1"
                     /gene_synonym="CLP-36"
                     /gene_synonym="CLP36"
                     /gene_synonym="hCLIM1"
                     /codon_start=1
                     /product="PDZ and LIM domain 1"
                     /protein_id="AAH00915.1"
                     /db_xref="GeneID:9124"
                     /db_xref="HGNC:HGNC:2067"
                     /db_xref="MIM:605900"
                     /translation="MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANL
                     CIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHKVWSPLVTEEGKRHPY
                     KMNLASEPQEVLHIGSAHNRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISNFN
                     NALESKTAASGVEANSRPLDHAQPPSSLVIDKESEVYKMLQEKQELNEPPKQSTSFLV
                     LQEILESEEKGDPNKPSGFRSVKAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRD
                     RHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARERVTPPEGYEVVTVFPK"
BASE COUNT          355 a          411 c          348 g          348 t
ORIGIN      
        1 gcccgcgccg cgccgctctt tctccgacag ctgccggggg tgccctgcaa gctgttccgc
       61 gcgtcctgcc cgtctgtccc cgcgggtcgt cgcccgccac agccgcgcca tgaccaccca
      121 gcagatagac ctccagggcc cggggccgtg gggcttccgc ctcgtgggcg gcaaggactt
      181 cgagcagcct ctcgccattt cccgggtcac tcctggaagc aaggcggctc tagctaattt
      241 atgtattgga gatgtaatca cagccattga tggggaaaat actagcaata tgacacactt
      301 ggaagctcag aacagaatca aaggctgcac agacaacttg actctcactg tagccagatc
      361 tgaacataaa gtctggtctc ctctggtgac ggaggaaggg aagcgtcatc catacaagat
      421 gaatttagcc tctgaacccc aggaggtcct gcacatagga agcgcccaca accgaagtgc
      481 catgcccttt accgcctcgc ctgcctccag cactactgcc agggtcatca caaaccagta
      541 caacaaccca gctggcctct actcttctga aaatatctcc aacttcaaca atgccctgga
      601 gtcaaagact gctgccagcg gggtggaggc gaacagcaga cccttagacc atgctcagcc
      661 tccaagcagc cttgtcatcg acaaagaatc tgaagtttac aagatgcttc aggagaaaca
      721 ggagttgaat gagcccccga aacagtccac gtctttcttg gttttgcagg aaatcctgga
      781 gtctgaagaa aaaggggatc ccaacaagcc ctcaggattc agaagtgtta aagctcctgt
      841 cactaaagtg gctgcgtcga ttggaaatgc tcagaagttg cctatgtgtg acaaatgtgg
      901 cactgggatt gttggtgtgt ttgtgaagct gcgggaccgt caccgccacc ctgagtgtta
      961 tgtgtgcact gactgtggca ccaacctgaa acagaagggc catttctttg tggaggatca
     1021 aatctactgt gagaagcatg cccgggagcg agtcacacca cctgagggtt atgaagtggt
     1081 cactgtgttc cccaagtgag ccagcagatc tgaccactgt tctccagcag gcctctgctg
     1141 cagctttttc tctcagtgtt ctggccctct cctctcttga aagttctctg cttactttgg
     1201 ttttccctct gcttgtaaaa cattgagtcc cctccctgcc ttggttaatt gactcacacc
     1261 agctgtgcga tgcccgcttt tacaattaaa ggaaaactgt tttgttcagt gtcaccttgt
     1321 cagcaacact gtgtcccttc gccccaccgt tcttctctgc tgcatttgga catcagccaa
     1381 atttgaaccc aatcaaatat aacgtgtctg acactgattt tgtttttact caataaatgt
     1441 atagactaca aaaaaaaaaa aa
//