LOCUS BC000914 1403 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 3, mRNA (cDNA
clone MGC:5205 IMAGE:3049167), complete cds.
ACCESSION BC000914
VERSION BC000914.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377552.
FEATURES Location/Qualifiers
source 1..1403
/db_xref="H-InvDB:HIT000030001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5205 IMAGE:3049167"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1403
/gene="SFRS3"
/gene_synonym="SRp20"
/db_xref="GeneID:6428"
/db_xref="HGNC:HGNC:10785"
/db_xref="MIM:603364"
CDS 106..600
/gene="SFRS3"
/gene_synonym="SRp20"
/codon_start=1
/product="splicing factor, arginine/serine-rich 3"
/protein_id="AAH00914.1"
/db_xref="GeneID:6428"
/db_xref="HGNC:HGNC:10785"
/db_xref="MIM:603364"
/translation="MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARN
PPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRD
DYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRS
NERK"
BASE COUNT 404 a 242 c 336 g 421 t
ORIGIN
1 ccgggtgagt gagagagttg gttggtgttg ggccggagga aagcgggaag actcatcgga
61 gcgtgtggat ttgagccgcc gcatttttta accctagatc tcgaaatgca tcgtgattcc
121 tgtccattgg actgtaaggt ttatgtaggc aatcttggaa acaatggcaa caagacggaa
181 ttggaacggg cttttggcta ctatggacca ctccgaagtg tgtgggttgc tagaaaccca
241 cccggctttg cttttgttga atttgaagat ccccgagatg cagctgatgc agtccgagag
301 ctagatggaa gaacactatg tggctgccgt gtaagagtgg aactgtcgaa tggtgaaaaa
361 agaagtagaa atcgtggccc acctccctct tggggtcgtc gccctcgaga tgattatcgt
421 aggaggagtc ctccacctcg tcgcagatct ccaagaagga gaagcttctc tcgcagccgg
481 agcaggtccc tttctagaga taggagaaga gagagatcgc tgtctcggga gagaaatcac
541 aagccgtccc gatccttctc taggtctcgt agtcgatcta ggtcaaatga aaggaaatag
601 aagacagttt gcaagagaag tggtgtacag gaaattactt catttgacag gagtatgtac
661 agaaaattca agttttgttt gagacttcat aagcttggtg catttttaag atgttttagc
721 tgttcaaatc tgtttgtctc ttgaaacagt gacacaaagg tgtaattctc tatggtttga
781 aatggatcat acgaggcatg taataccaag aattgttact ttacaatgtt cccttaagca
841 aaattgaatt tgctttgaac ttttagttat gcacagactg ataataaacc tctaaacctg
901 cccagcggaa gtgtgttttt ttttaaattt aaatacagaa acaactggca aaaattgaac
961 taagatttac ttttttttcc atagctggga tataggctgc agctatagtt gaacaagcag
1021 tctttaaaaa ctgctgtgaa acacaggcca tcagggaaaa cgaaatgctg cactattaaa
1081 ttagaggttt ttgaaaaatc caactctcat cctgggcaga ggttgcctag ttggtataga
1141 atgttaagtt tcaagaaagt ttacctttgc tttaggtcat aagttcctta tttgattgct
1201 gtatatggat acatggctgt tcgtgacatt ctttatgtgc aaatttgtga tttcaaaaat
1261 gtcctgccag tttaagggta cattgtagag ccgaactttg agttactgtg caagattttt
1321 ttttcatgct gtcatttgta atatgttttg tgagaatcct tgggattaaa gttttggtta
1381 caaattgtta aaaaaaaaaa aaa
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