LOCUS BC000868 1240 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens hypothetical protein MGC5590, mRNA (cDNA clone
MGC:5590 IMAGE:3460233), complete cds.
ACCESSION BC000868
VERSION BC000868.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1240)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1240)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1240
/db_xref="H-InvDB:HIT000029964"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5590 IMAGE:3460233"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1240
/gene="MGC5590"
/db_xref="GeneID:79024"
CDS 190..447
/gene="MGC5590"
/codon_start=1
/product="hypothetical protein MGC5590"
/protein_id="AAH00868.1"
/db_xref="GeneID:79024"
/translation="MEAGERIDASQLPHRVLETRGHAISILFGFWTSFICDTYIVLAW
ISKIKGSPDVSASSDEPYARIQQSRRQCHAEEDQSQVPEAG"
BASE COUNT 317 a 275 c 301 g 347 t
ORIGIN
1 gtgttcatgg gcctcattaa gctctgcctt ccttctgctt tttggagcct ggcctttggt
61 tggccttgaa tgaagagtgg ggccccaaaa gtaccactgt cagcactctc cagcatcatc
121 tggctgtctg gcaccatcaa agaattgcat ttctgaccca agaagagctt atgggtggat
181 gggggtggga tggaagctgg ggagaggatt gatgccagcc agctgcctca cagggtgctg
241 gaaacacgtg gccatgccat tagcatcctg ttcggcttct ggacgagttt catctgtgac
301 acctacatag tcctcgcttg gatcagcaag ataaaaggca gccctgatgt tagtgcctcc
361 tctgatgagc catacgccag aatccagcag agcagaaggc aatgccacgc agaagaggac
421 caaagtcagg tgccagaagc aggctgacct ggaaaggtgg aggaaaagaa ggcagaaggg
481 agagatgaag cccaagaacc tgagtatttt tctcaggcaa gactcaggac tgctctggac
541 attcagaagc tgagtgtgca agtgtgctgt gtagttcaag gccaccacca ctgaagaggc
601 caaggacacc ttagtaggaa ttctaacctg gcttccaggg agaggtgctt ccaaattggc
661 cctgtaggca aattcacttt tttcaccctc taagcgagta agtgcttgtt cccaatttcc
721 atggtttagt cttcagtttc agtctttggt ctcctctggt ctatcagctc ccatctctct
781 cccagtcttt ttctttattc tgtgacacct gttgaatgag gcacataggg tttgtagtca
841 ctgtagtgtt ccttgtggtt gtgaggtaat aggctaatat tatcactttc tcagaaagtc
901 ttcaaaatta tcatgaggag gtgatgcatt catctgctgg gaggtgtctg tgtggtcaga
961 taagatgatg gctacattcc attcctatcc tgtcattcaa tcattcttcc tccagggagc
1021 cactgaggga cgtgatagtc caaagcactc agctaaaacg gaattgcaaa catggtaccc
1081 acaactttgg tttcttatca tccatttgta tatctgcatg tagtctgtct ctgatttagg
1141 gtttaggttc ctctgtattt ttttttcttt tcctgccctt tgagagttta ataaaagcca
1201 gaagcatctt gtaataaaaa aaaaaaaaaa aaaaaaaaaa
//