LOCUS BC000864 914 bp mRNA linear HUM 12-OCT-2007
DEFINITION Homo sapiens Sjogren syndrome nuclear autoantigen 1, mRNA (cDNA
clone MGC:5078 IMAGE:3459939), complete cds.
ACCESSION BC000864
VERSION BC000864.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 914)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: a Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505324.
FEATURES Location/Qualifiers
source 1..914
/db_xref="H-InvDB:HIT000029961"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5078 IMAGE:3459939"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..914
/gene="SSNA1"
/gene_synonym="N14"
/gene_synonym="NA-14"
/gene_synonym="NA14"
/db_xref="GeneID:8636"
/db_xref="HGNC:HGNC:11321"
/db_xref="MIM:610882"
CDS 81..440
/gene="SSNA1"
/gene_synonym="N14"
/gene_synonym="NA-14"
/gene_synonym="NA14"
/codon_start=1
/product="Sjogren syndrome nuclear autoantigen 1"
/protein_id="AAH00864.1"
/db_xref="GeneID:8636"
/db_xref="HGNC:HGNC:11321"
/db_xref="MIM:610882"
/translation="MTQQGAALQNYNNELVKCIEELCQKREELCRQIQEEEDEKQRLQ
NEVRQLTEKLARVNENLARKIASRNEFDRTIAETEAAYLKILESSQTLLSVLKREAGN
LTKATAPDQKSSGGRDS"
BASE COUNT 206 a 272 c 290 g 146 t
ORIGIN
1 ccgtggggga gtcgtgcgca ggcgcggaca gcgctgcttc cgcggcggtt ggggtggtgg
61 ggccccgggc ggcgttgacc atgacccagc agggcgcggc gctgcagaac tacaacaacg
121 agctggtcaa gtgcatagag gagctgtgcc agaagcggga ggagctgtgc cggcagatcc
181 aggaggagga ggacgagaag cagcggctgc agaatgaggt gaggcagctg acagagaagc
241 tggcccgcgt caacgagaac ctggcacgca agattgcctc tcgcaacgag ttcgaccgga
301 ccatcgcgga gacggaggcc gcctacctca agatcctgga gagctcccag actttgctca
361 gcgttctcaa gagggaagct gggaacctga ccaaggctac agccccagac cagaaaagta
421 gcggcggcag ggacagctga ccagaccacg ggcagggcct gcctccgtgt gcccctcagc
481 tcagccccag caagtgtgtg ctcagagcat ctttgttctt cacggcagca gctaccttcc
541 ctcactgtct caggtgccga gaggggcagg tgccagcctc cactggcatc agtgacaagc
601 ccagggcaca gcccacccgg gggtcctcgc ttcatgctca cacaggctat ggggatggtg
661 ggctccaggt cagctctgca aggggcttgt ctctgtggca cccacactcc tgccctgcca
721 gggaggctct ggttgtctga gcaccatggg ggccccctca ccttgtccct cctcagccag
781 cagaggccca gggcaaggga caggaggaca ggggttctcc ttcaccacag aacccaaacc
841 tcaggtctca cccctgtggc ctgtgattat gaataaagat tatctttgta aagatcaaaa
901 aaaaaaaaaa aaaa
//