LOCUS BC000862 951 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens polyribonucleotide nucleotidyltransferase 1, mRNA
(cDNA clone IMAGE:3459656), partial cds.
ACCESSION BC000862
VERSION BC000862.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 951)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000862.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: e Column: 16.
FEATURES Location/Qualifiers
source 1..951
/db_xref="H-InvDB:HIT000085908"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3459656"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..951
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/db_xref="GeneID:87178"
CDS <1..803
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/codon_start=3
/product="PNPT1 protein"
/protein_id="AAH00862.2"
/db_xref="GeneID:87178"
/translation="DPEKGEIEDYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADI
KLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASRKENGPVVETVQVPLSKRAK
FVGPGGYNLKKLQAETGVTISQVDEETFSVFAPTPSAMHEARDFITEICKDDQEQQLE
FGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHPTALGLEVGQEIQVKY
FGRDPADGRMRLSRKVLQSPATTVVRTLNDRSSIVMGEPISQSSSNSQ"
misc_feature 18..707
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/note="Pnp; Region: Polyribonucleotide
nucleotidyltransferase (polynucleotide phosphorylase)
[Translation, ribosomal structure and biogenesis]"
/db_xref="CDD:COG1185"
BASE COUNT 342 a 152 c 190 g 267 t
ORIGIN
1 ccgatcctga gaagggtgaa atagaagatt atcgtttgct gacagatatt ttgggaattg
61 aagattacaa tggtgacatg gacttcaaaa tagctggcac taataaagga ataactgcat
121 tacaggctga tattaaatta cctggaatac caataaaaat tgtgatggag gctattcaac
181 aagcttcagt ggcaaaaaag gagatattac agatcatgaa caaaactatt tcaaaacctc
241 gagcatctag aaaagaaaat ggacctgttg tagaaactgt tcaggttcca ttatcaaaac
301 gagcaaaatt tgttggacct ggtggctata acttaaaaaa acttcaggct gaaacaggtg
361 taactattag tcaggtggat gaagaaacgt tttctgtatt tgcaccaaca cccagtgcta
421 tgcatgaggc aagagacttc attactgaaa tctgcaagga tgatcaggag cagcaattag
481 aatttggagc agtatatacc gccacaataa ctgaaatcag agatactggt gtaatggtaa
541 aattatatcc aaatatgact gcggtactgc ttcataacac acaacttgat caacgaaaga
601 ttaaacatcc tactgcccta ggattagaag ttggccaaga aattcaggtg aaatactttg
661 gacgtgaccc agccgatgga agaatgaggc tttctcgaaa agtgcttcag tcgccagcta
721 caaccgtggt cagaactttg aatgacagaa gtagtattgt aatgggagaa cctatttcac
781 agtcatcatc taattctcag tgattttttt ttttaaagag aattctagaa ttctattttg
841 tctagggtga tgtgctgtag agcaacattt tagtagtatc ttccattgtg tagatttcta
901 tataatataa atacatttta attatttgta ctaaaaaaaa aaaaaaaaaa a
//