LOCUS BC000848 1162 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1, mRNA
(cDNA clone IMAGE:3458173), partial cds.
ACCESSION BC000848
VERSION BC000848.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: i Column: 6.
FEATURES Location/Qualifiers
source 1..1162
/db_xref="H-InvDB:HIT000085901"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3458173"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1162
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
CDS <1..694
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/codon_start=2
/product="UBE2Q1 protein"
/protein_id="AAH00848.1"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
/translation="EMPEDTEDLDHYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKN
QRQDYLNGAVSGSVQATDRLMKELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVD
QDSALHNDLQILKEKEGADFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICM
ELLTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKSQYSLTRAQQSYKSLVQIHE
KNGWYTPPKEDG"
BASE COUNT 355 a 263 c 254 g 290 t
ORIGIN
1 ggagatgcct gaggacacag aagacttaga tcactatgaa atgaaagagg aagagccagc
61 tgagggcaag aaatctgaag atgatggcat tggaaaagaa aacttggcca tcctagagaa
121 aattaaaaag aaccagaggc aagattactt aaatggtgca gtgtctggct cggtgcaggc
181 cactgaccgg ctgatgaagg agctcaggga tatataccga tcacagagtt tcaaaggcgg
241 aaactatgca gtcgaactcg tgaatgacag tctgtatgat tggaatgtca aactcctcaa
301 agttgaccag gacagcgctt tgcacaacga tctccagatc ctcaaagaga aagaaggagc
361 cgacttcatt ctacttaact tttcctttaa agataacttt ccctttgacc caccatttgt
421 cagggttgtg tctccagtcc tctctggagg gtatgttctg ggcggagggg ccatctgcat
481 ggaacttctc accaaacagg gctggagcag tgcctactcc atagagtcag tgatcatgca
541 gatcagtgcc acactggtga aggggaaagc acgagtgcag tttggagcca acaaatctca
601 atacagtctg acaagagcac agcagtccta caagtccttg gtgcagatcc acgaaaaaaa
661 cggctggtac acacccccaa aagaagacgg ctaaccctgg agtatcaccc ttcctccctc
721 cccaggcacc actggaccaa ttacctttga atgctgtatt tggatctcac gctgcctctg
781 tggttccctc cctcattttt cctggacgtg atagctctgc ctattacagg acaatgatgg
841 ctattctaaa cgctaaggaa aaaaaacaaa cacagaactg tttcaagtac tcaagactga
901 cttacagacc aaccaaccac cttgctggaa cccttgctag caggcattct tataaaagaa
961 actttcgagc ctccttatat tgctggaaac tcagctgtgc tccagactag agcctcctta
1021 cctatgctat ggatttttaa tttattttct cttatttcat gtacactgct ttttttggtt
1081 acagtgtatg atggatgtgt atgaaaaaaa tgtatctttg ggaaaacaat tacagtttgt
1141 taatttgaaa aaaaaaaaaa aa
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