LOCUS BC000846 873 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calcium and integrin binding 1 (calmyrin), mRNA (cDNA
clone MGC:5148 IMAGE:3457844), complete cds.
ACCESSION BC000846
VERSION BC000846.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000846.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9951921.
FEATURES Location/Qualifiers
source 1..873
/db_xref="H-InvDB:HIT000029953"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5148 IMAGE:3457844"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..873
/gene="CIB1"
/gene_synonym="CALMYRIN"
/gene_synonym="CIB"
/gene_synonym="KIP"
/gene_synonym="SIP2-28"
/db_xref="GeneID:10519"
/db_xref="HGNC:HGNC:16920"
/db_xref="MIM:602293"
CDS 43..618
/gene="CIB1"
/gene_synonym="CALMYRIN"
/gene_synonym="CIB"
/gene_synonym="KIP"
/gene_synonym="SIP2-28"
/codon_start=1
/product="calcium and integrin binding 1 (calmyrin)"
/protein_id="AAH00846.1"
/db_xref="GeneID:10519"
/db_xref="HGNC:HGNC:16920"
/db_xref="MIM:602293"
/translation="MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRS
VESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTA
TPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES
DIDRDGTINLSEFQHVISRSPDFASSFKIVL"
BASE COUNT 190 a 249 c 245 g 189 t
ORIGIN
1 ccgctcgagg cgagttggcg gagctgtgcg cgcggcgggg cgatgggggg ctcgggcagt
61 cgcctgtcca aggagctgct ggccgagtac caggacttga cgttcctgac gaagcaggag
121 atcctcctag cccacaggcg gttttgtgag ctgcttcccc aggagcagcg gagcgtggag
181 tcgtcacttc gggcacaagt gcccttcgag cagattctca gccttccaga gctcaaggcc
241 aaccccttca aggagcgaat ctgcagggtc ttctccacat ccccagccaa agacagcctt
301 agctttgagg acttcctgga tctcctcagt gtgttcagtg acacagccac gccagacatc
361 aagtcccatt atgccttccg catctttgac tttgatgatg acggaacctt gaacagagaa
421 gacctgagcc ggctggtgaa ctgcctcacg ggagagggcg aggacacacg gcttagtgcg
481 tctgagatga agcagctcat cgacaacatc ctggaggagt ctgacattga cagggatgga
541 accatcaacc tctctgagtt ccagcacgtc atctcccgtt ctccagactt tgccagctcc
601 tttaagattg tcctgtgaca gcagccccag cgtgtgtcct ggcaccctgt ccaagaacct
661 ttctactgct gagctgtggc caaggtcaag cctgtgttgc cagtgcgggc caagctggcc
721 cagcctggag ctggcgctgt gcagcctcac cccgggcagg ggcggccctc gttgtcaggg
781 cctctcctca ctgctgttgt cattgctccg tttgtgtttg tactaatcag taataaaggt
841 ttagaagttt gaaaaaaaaa aaaaaaaaaa aaa
//