LOCUS BC000838 583 bp mRNA linear HUM 12-OCT-2006 DEFINITION Homo sapiens S100 calcium binding protein A4, mRNA (cDNA clone MGC:5193 IMAGE:3456833), complete cds. ACCESSION BC000838 VERSION BC000838.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 583) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 583) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: b Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9845515. FEATURES Location/Qualifiers source 1..583 /db_xref="H-InvDB:HIT000085895" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5193 IMAGE:3456833" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..583 /gene="S100A4" /gene_synonym="18A2" /gene_synonym="42A" /gene_synonym="P9KA" /gene_synonym="PEL98" /db_xref="GeneID:6275" /db_xref="HGNC:HGNC:10494" /db_xref="MIM:114210" CDS 103..408 /gene="S100A4" /gene_synonym="18A2" /gene_synonym="42A" /gene_synonym="P9KA" /gene_synonym="PEL98" /codon_start=1 /product="S100 calcium binding protein A4" /protein_id="AAH00838.1" /db_xref="GeneID:6275" /db_xref="HGNC:HGNC:10494" /db_xref="MIM:114210" /translation="MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPS FLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMCNEFFEGFPDKQPRKK" BASE COUNT 157 a 135 c 148 g 143 t ORIGIN 1 caaccctctc tcctcagcgc ttcttctttc ttggtttggt gcttctgaga tgtgggcttg 61 cacacgctgt tgctatagta cgtgttgatc ctgactgctg tcatggcgtg ccctctggag 121 aaggccctgg atgtgatggt gtccaccttc cacaagtact cgggcaaaga gggtgacaag 181 ttcaagctca acaagtcaga gctaaaggag ctgctgaccc gggagctgcc cagcttcttg 241 gggaaaagga cagatgaagc tgctttccag aagctgatga gcaacttgga cagcaacagg 301 gacaacgagg tggacttcca agagtactgt gtcttcctgt cctgcatcgc catgatgtgt 361 aacgaattct ttgaaggctt cccagataag cagcccagga agaaatgaaa actcctctga 421 tgtggttggg gggtctgcca gctggggccc tccctgtcgc cagtgggcac tttttttttt 481 ccaccctggc tccttcagac acgtgcttga tgctgagcaa gttcaataaa gattcttgga 541 agtttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //