LOCUS BC000804 1281 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adaptor-related protein complex 3, sigma 1 subunit,
mRNA (cDNA clone MGC:5088 IMAGE:3452302), complete cds.
ACCESSION BC000804
VERSION BC000804.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1281)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1281)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50959213.
FEATURES Location/Qualifiers
source 1..1281
/db_xref="H-InvDB:HIT000029931"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5088 IMAGE:3452302"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1281
/gene="AP3S1"
/gene_synonym="Sigma3A"
/db_xref="GeneID:1176"
/db_xref="HGNC:HGNC:2013"
/db_xref="MIM:601507"
CDS 85..666
/gene="AP3S1"
/gene_synonym="Sigma3A"
/codon_start=1
/product="adaptor-related protein complex 3, sigma 1
subunit"
/protein_id="AAH00804.1"
/db_xref="GeneID:1176"
/db_xref="HGNC:HGNC:2013"
/db_xref="MIM:601507"
/translation="MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDE
NVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFE
NVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKSEAGLAGAPAR
AVSAVKNMNLPEIPRNINIGDISIKVPNLPSFK"
BASE COUNT 404 a 236 c 250 g 391 t
ORIGIN
1 atcgcaggcg agattacgag gcgaggctcg cgcgcccgcc cccgccctgg cccccagtgc
61 ccacccggtc ggcccggcac agccatgatc aaggcgatcc taatcttcaa caaccacggg
121 aagccgcggc tctccaagtt ctaccagccc tacagtgaag atacacaaca gcaaatcatc
181 agggagactt tccatttggt atctaagaga gatgaaaatg tttgtaattt cctagaagga
241 ggattattaa ttggaggatc tgacaacaaa ctgatttata gacattatgc aacgttatat
301 tttgtcttct gtgtggattc ttcagaaagt gaacttggca ttttagatct aattcaagta
361 tttgtggaaa cattagacaa atgttttgaa aatgtctgtg agctggattt gattttccat
421 gtagacaagg ttcacaatat tcttgcagaa atggtgatgg ggggaatggt attggagaca
481 aatatgaatg agattgttac acaaattgat gcacaaaata agctggaaaa atctgaggct
541 ggcttagcag gagctccagc ccgtgctgta tcagctgtaa agaatatgaa tcttcctgag
601 atcccaagaa atattaacat tggtgacatc agtataaaag tgccaaacct gccctctttt
661 aaataaaaat gtaaaaaggc cactcccagg taaaatccag ggggaagagt catctaagtt
721 taccatgcag ttgtttacca aaaatagagg aggagagtct taacttttgc tcttggattt
781 aagtcaaggt actgtataga agttgtgtaa aatcagtatg aaagttcaat gttgctgttc
841 ttgctcagtg attttaaaga aattgagtag ttcctatgtg attttttttt ttcttttcta
901 aactgcattc ctgtgcccac ctacggcatg cctctatgta ttggctacta cagtgtttta
961 aaaagtgttt cagatatttc tctaattatg tacaacctaa aatgttggtg ttttgtatgg
1021 atcacaagtg cagcattcct taattccttc tgctatatgt cacacagttg ttatttggag
1081 aaccaagtat gtattgcatg aaaacattat gacttttttc tcttagttta aataaactcc
1141 aaggtaactg gacttctaaa gcacctttct gtttgcctga tatctacttt agcaataatt
1201 ttttttacaa ccctctgact caacaaagta aataaaagta tattttatca ctattaaaaa
1261 aaaaaaaaaa aaaaaaaaaa a
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