LOCUS BC000799 1211 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB13, member RAS oncogene family, mRNA (cDNA clone
MGC:5074 IMAGE:3451945), complete cds.
ACCESSION BC000799
VERSION BC000799.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34850075.
FEATURES Location/Qualifiers
source 1..1211
/db_xref="H-InvDB:HIT000029928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5074 IMAGE:3451945"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1211
/gene="RAB13"
/gene_synonym="GIG4"
/db_xref="GeneID:5872"
/db_xref="HGNC:HGNC:9762"
/db_xref="MIM:602672"
CDS 95..706
/gene="RAB13"
/gene_synonym="GIG4"
/codon_start=1
/product="RAB13, member RAS oncogene family"
/protein_id="AAH00799.1"
/db_xref="GeneID:5872"
/db_xref="HGNC:HGNC:9762"
/db_xref="MIM:602672"
/translation="MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGID
FKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW
MKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDE
AFSSLARDILLKSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG"
BASE COUNT 392 a 256 c 335 g 228 t
ORIGIN
1 ctgggctccg tgccgctctg tttgccaacc gtccagtccc gcctaccagt gccgggcgct
61 ccccacccct cccccggctc ccccggtgtc cgccatggcc aaagcctacg accacctctt
121 caagttgctg ctgatcgggg actcgggggt gggcaagact tgtctgatca ttcgctttgc
181 agaggacaac ttcaacaaca cttacatctc caccatcgga attgatttca agatccgcac
241 tgtggatata gaggggaaga agatcaaact acaagtctgg gacacggctg gccaagagcg
301 gttcaagaca ataactactg cctactaccg tggagccatg ggcattatcc tagtatacga
361 catcacggat gagaaatctt tcgagaatat tcagaactgg atgaaaagca tcaaggagaa
421 tgcctcggct ggggtggagc gcctcttgct ggggaacaaa tgtgacatgg aggccaagag
481 gaaggtgcag aaggagcagg ccgataagtt ggctcgagag catggaatcc gatttttcga
541 aactagtgct aaatccagta tgaatgtgga tgaggctttt agttccctgg cccgggacat
601 cttgctcaag tcaggaggcc ggagatcagg aaacggcaac aagcctccca gtactgacct
661 gaaaacttgt gacaagaaga acaccaacaa gtgctccctg ggctgaggac cctttcttgc
721 ctccccaccc cggaagctga acctgaggga gacaacggca gagggagtga gcaggggaga
781 aatagcagag gggcttggag ggtcacatag gtagatggta aagagaatga ggagaaaaag
841 gagaaaaggg aaaagcagaa aggaaaaaaa ggaagagaga ggaagggaga agggagagga
901 atgaattgag gaagtgaaag aaggcaagga ggtaggaaga gagggaggag gaaaggaagg
961 agagatgcct caggcttcag accttacctg ggttttcagg gcaaacataa atgtaaatac
1021 actgatttat tctgttacta gatcaggttt tagggtcctg caaaaggcta gctcggcact
1081 acactaggga atttgctcct gttctgtcac ttgtcatggt ctttcttggt attaaaggcc
1141 accatttgca caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa a
//