LOCUS BC000787 3133 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens ring finger protein 216, mRNA (cDNA clone
IMAGE:3506949), partial cds.
ACCESSION BC000787
VERSION BC000787.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3133)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3133)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000787.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: i Column: 10.
FEATURES Location/Qualifiers
source 1..3133
/db_xref="H-InvDB:HIT000029919"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3506949"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3133
/gene="RNF216"
/gene_synonym="TRIAD3"
/gene_synonym="U7I1"
/gene_synonym="UBCE7IP1"
/gene_synonym="ZIN"
/db_xref="GeneID:54476"
/db_xref="HGNC:HGNC:21698"
/db_xref="MIM:609948"
CDS <1..1445
/gene="RNF216"
/gene_synonym="TRIAD3"
/gene_synonym="U7I1"
/gene_synonym="UBCE7IP1"
/gene_synonym="ZIN"
/codon_start=3
/product="RNF216 protein"
/protein_id="AAH00787.2"
/db_xref="GeneID:54476"
/db_xref="HGNC:HGNC:21698"
/db_xref="MIM:609948"
/translation="SQDIKWALHELKGHYAITRKALSDAIKKWQELSPETSGKRKKRK
QMNQYSYIDFKFEQGDIKIEKRMFFLENKRRHCRSYDRRALLPAVQQEQEFYEQKIKE
MAEHEDFLLALQMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQ
EAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVR
CPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNGLTCEELAEKDDIKYRTS
IEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSINGYDHFCQHPRSP
GAPCQECSRCSLWTDPTEDDEKLIEEIQKEAEEEQKRKNGENTFKRIGPPLEKPVEKV
QRVEALPRPVPQNLPQPQMPPYAFAHPPFPLPPVRPVFNNFPLNMGPIPAPYVPPLPN
VRVNYDFGPIHMPLEHNLPMHFGPQPRHRF"
BASE COUNT 726 a 881 c 870 g 656 t
ORIGIN
1 gtagtcagga catcaagtgg gccctgcacg agctcaaagg acactatgca atcacccgaa
61 aggccttgtc tgatgccatt aaaaaatggc aggagctgtc accagaaacc agtggaaaaa
121 ggaagaagag aaaacaaatg aaccagtatt cttacattga tttcaagttt gaacaaggtg
181 acataaaaat agaaaagagg atgttctttc ttgaaaataa gcgacgacat tgtaggtcct
241 atgaccgacg tgctctcctt ccagctgtgc aacaagagca ggagttctat gagcagaaaa
301 tcaaagagat ggcagagcat gaagactttt tgcttgccct acagatgaat gaagaacagt
361 atcaaaagga tggccagctg attgagtgtc gctgctgcta tggggaattt ccattcgagg
421 agctgacgca gtgcgcagat gctcacttgt tctgcaaaga gtgtctcatc agatatgccc
481 aagaggcagt ctttggatct ggaaagttgg agctcagctg catggaaggc agctgcacgt
541 gttcgttccc aaccagtgag ctggagaagg tgctccccca gaccatcctg tataagtact
601 atgagcgaaa agccgaggag gaggttgcgg cagcctacgc cgacgagctt gtcaggtgcc
661 cgtcctgtag ctttccggct ctgttggaca gtgatgtgaa gaggttcagc tgtcctaatc
721 ctcactgccg aaaggaaacc tgtaggaagt gtcagggact ctggaaagaa cataatggcc
781 tcacctgtga agagctggct gaaaaagacg acatcaagta ccgtacctct attgaagaaa
841 aaatgactgc tgcccgcatt agaaaatgcc acaagtgtgg gactggcctc atcaaatctg
901 aaggctgcaa ccgcatgtct tgccgctgtg gtgcccagat gtgctacctc tgtcgagttt
961 ctattaatgg atatgaccat ttctgccaac atccccgctc accaggagcc ccttgccagg
1021 agtgttcaag atgctctctc tggaccgatc ccactgaaga tgatgagaag cttattgagg
1081 aaatccagaa ggaggctgaa gaggaacaga aaagaaagaa tggagagaac accttcaaac
1141 gcattggacc cccgctggag aagcctgtgg agaaggtgca gagggtggag gccctcccga
1201 ggcccgttcc gcagaacctg ccacagccac agatgccacc ctatgccttc gcgcacccac
1261 ccttccccct gcctcccgtg cggcctgtgt tcaacaactt cccactcaac atggggccta
1321 tcccagcccc gtacgtgccc cctctgccca acgtgcgggt caactatgac ttcggtccca
1381 tccacatgcc cctggagcac aacctgccca tgcactttgg cccccagccg cggcatcgct
1441 tctgatggcc ccgaatcccc attgagcagc acaaagcccg tttggggtag gagtgtggat
1501 ggagaaccct cccccaaggc tggtgtctgt accattgcat cctaagtcag cttgaagggt
1561 aggctggttt tcttcccacc cctttcctag aagggctact gctcctggaa gagtggacgg
1621 atccataata aagacgtccc aaatggtgga gttcggagag agctgcgatg tgaactgccc
1681 ctcccctcgc atcccccagg ccaccaacgg cagtccttct gccttgtcca tggcataggc
1741 catagaccag gtccctgctg ctcacacctg ggcctctcct cggagccgac ccctgggtag
1801 caaggcagcc gagagcatct ccctggaggg gcccacggtt gggccaaggg cagagggggc
1861 tgcacctgcg ggcctgggaa gcattgctca gggtgggggg ctgggaccat ggcccgcaga
1921 ggcactgcca cagctgtgag ggccaagatg ctgtcccccc atccaaaacc cgtgcgccac
1981 tgcagtgagt gttgagggca cctctcctcc cctcttacac ctactcagat gaggcagcag
2041 cagacccatc tcgcggcggg ggttttgttc tgttgccgcc taactttctc atcctcggtc
2101 tctggaaagt caggctgaga aatcctttcc caggccaggc cgctgcggta cactggatgg
2161 ttctgaagct ggcccattga aagagcctct taaggcagct gggacagagg cctggtggcc
2221 ctgctgggca gcccaactgc tgggggagac gtttctgcca ccctgggtga tgagcagctt
2281 ttcccccctg gctttctggg ggaggagtgg gcctccttag ggagacaggt gaccctgggt
2341 gccacccctg ccccgtgtgt gccccgggtg ttctcagtgg ttgctgaagg caggtagagg
2401 gtgctgtcca gtatccccca tgtgaaggtc acttcccttc tcatggagtc agctgagcat
2461 cagctcagcc ctgccatgtc cccactcacc ctcctcgcct cctgtccggc cctgggtttc
2521 tagcggtgcc tgaggcatca ctctggccca ttgacagatg agaggtctga agccttcctg
2581 gccacaggca tcactttctc ctcctcctca tgccctgcct tgtccttgtc gtgttgccat
2641 ggggttctga gaggctggga gttcacagac ctcagacaca gctgagtccg acaaccattg
2701 gggtggggct gcatcagtct ccggagtggc ccgccacctc ctgaagcagg gcctggccca
2761 cccaaggtgc ctggggcagg cgggcaccgt cattcgctgc cattggcttc tcagatgtat
2821 ttcaaggact aaagtgggct ctaagatcta agatggcccg gcgcggtggc tcccgcctgt
2881 aatcccagca ctttgggagg ccgaggcggg cggatgagtt gaggtcggga gtttgagtcc
2941 ccgtctctac taaaaataca aaattagccg gacaaggtgg cgcatgccta taatcccagg
3001 tactcaggag gctgaggcag gagaatcact tgaacctggg aggcagaggt tgcagtgagc
3061 caagattgtg ccactgcact ccagcctgag caacaaaagc aaaactctat ctttaaaaaa
3121 aaaaaaaaaa aaa
//