LOCUS BC000785 820 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SCAN domain containing 1, mRNA (cDNA clone MGC:838 IMAGE:3508136), complete cds. ACCESSION BC000785 VERSION BC000785.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 820) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 820) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000785.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: f Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15967155. FEATURES Location/Qualifiers source 1..820 /db_xref="H-InvDB:HIT000029918" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:838 IMAGE:3508136" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..820 /gene="SCAND1" /gene_synonym="RAZ1" /gene_synonym="SDP1" /db_xref="GeneID:51282" /db_xref="HGNC:HGNC:10566" CDS 99..638 /gene="SCAND1" /gene_synonym="RAZ1" /gene_synonym="SDP1" /codon_start=1 /product="SCAN domain containing 1" /protein_id="AAH00785.1" /db_xref="GeneID:51282" /db_xref="HGNC:HGNC:10566" /translation="MAATEPILAATGSPAAVPPEKLEGAGSSSAPERNCVGSSLPEAS PPAPEPSSPNAAVPEAIPTPRAAASAALELPLGPAPVSVAPQAEAEARSTPGPAGSRL GPETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAIL PEAARARRIRRRTDVRITG" BASE COUNT 178 a 263 c 262 g 117 t ORIGIN 1 gagactttcg cttccggctg ccgcaggcgc ttcgctggtg cagacgcagt gctgagcaca 61 cagctaccgg acaaagagtg acgcccggag ctggagttat ggcggctacg gagccgatct 121 tggcggccac tgggagtccc gcggcggtgc caccggagaa actggaagga gccggttcga 181 gctcagcccc tgagcgtaac tgtgtgggct cctcgctgcc agaggcctca ccgcctgccc 241 ctgagccttc cagtcccaac gccgcggtcc ctgaagccat ccctacgccc cgagctgcgg 301 cctccgcggc cctggagctg cctctcgggc ccgcacccgt gagcgtagcg cctcaggccg 361 aagctgaagc gcgctccaca ccaggccccg ccggctctag actcggtccc gagacgttcc 421 gccagcgttt ccggcagttc cgctaccagg atgcggcggg tccccgggag gctttccggc 481 agctgcggga gctgtcccgc cagtggctgc ggcctgacat ccgcaccaag gagcagatcg 541 tggagatgct ggtgcaagag cagctgctcg ccatcctgcc cgaggcggct cgggcccggc 601 ggatccgccg ccgcacggat gtgcgcatca ctggctgagc ggtggagctg cgggcggcca 661 gggccgggcg ctctgtgcgg actggggcca tgatcgggcc cgggggcctg agcctgggac 721 cccaccccgt gttaatgaaa aatgagtttt ggcagcaaaa aaaaaaaaaa aaaaaaaaaa 781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //